| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866838
Identifier: 119866838
GI number: 119866838
Start: 831817
End: 833037
Strand: Reverse
Name: 119866838
Synonym: Mkms_0784
Alternate gene names: NA
Gene position: 833037-831817 (Counterclockwise)
Preceding gene: 119866842
Following gene: 119866837
Centisome position: 14.52
GC content: 71.83
Gene sequence:
>1221_bases ATGAAGACCCGGGCGGATGTGGTCGTTGTCGGCGCCGGACCTGCGGGTTCGGCTGCCGCGGCCTGGGCGGCCCGCGCCGG TCGCGACGTGTTGGTGATCGACTCCGCCCGCTTCCCGCGCGACAAGGCGTGCGGTGACGGGCTGACCCCGCGGGCGGTCG CCGAACTCGAACGCCTCGGCCTCGGGCCGTGGCTGGACACCCGCATCCGCCACCGCGGTCTGCGGATGTCGGGATTCGGC GCGGCCGTGGAGGTCGCCTGGCCCGGCCCGTCGTTCCCGTCCACCGGCAGCGCGGTGCCGCGCACCGAACTCGACGACCG GATCCGCTCCGTCGCCGCCGACGACGGCGCCAAGATGCTCCTCGGCACCAAAGCCGTTGGTGTCGAACATGATTCGTCGG GACGCGTGGAGACGTTGACGCTGGACTCGGGTGAGGAGGTCGGTGTCGGGACCTTGATCGTCGCCGACGGGGCGCGGTCG ACACTGGGCCGTGCGCTCGGCCGGCAGTGGCATCAGCAGACCGTCTACGGCGTCGCGGTGCGCGGTTACCTCGCCAGCCC GCGCAGCGACGAACCGTGGATCACGTCGCACCTGGAACTGCGGTCACCGGAGGGCAAGGTGCTGCCCGGCTACGGCTGGA TCTTCCCGCTGGGCAACGGTGAGGTGAACATCGGCGTCGGCGCCCTGGCGACCGAAAAACGGCCCGCCGACGCCGCTTTG CGGCCGCTGATGTCGCATTACACGGCGTTGCGGCGCGAGGAATGGGGCTTCGACGGTGAGCCGCGCGCACCGCTGTCCGC GCTGCTGCCGATGGGCGGCGCGGTGTCGGGAGTCGCCGGCCCCAACTGGATGCTGATCGGGGACGCCGCGGCGTGTGTGA ACCCGCTCAACGGCGAAGGCATCGACTACGGGTTGGAGACCGGCCGGCTGGCCGCCGACCTGCTCGGCTCCAGTGACCTC TCACAGGCGTGGCCCGCCGTGCTGAGCGACCACTACGCCCGCGGATTCTCCGTCGCGCGCCGGCTGGCGTTGCTGCTCAC GCTGCCGAGATTCCTCCCGCTGACCGGTCCGGTGGCGATGCGGTCGACGGCGCTGATGCGCATTGCGGTCCGGGTGATGG GCAACCTGGTCACCGACGAGGACGCCGACTGGATCGCCCGGGTGTGGCGCGCGGGTGGTCTGGCCTCGCGCGGCCTGGAC GCGCGCAAACCGTTCAGCTGA
Upstream 100 bases:
>100_bases GCGACTCCGGCGCGGACGTCGGCCGCGAAGGCCGCGTCGCCGAAGTCCACGCCCGCCACCACAGTCGCCGGTGTCCTCAC CCTGCCAACATACTGTGACA
Downstream 100 bases:
>100_bases TCAGCCGGCGACGCGGCCGGTCGTCGTCCGTGCGACTCGCATCGGTCAGCGCGAGCGCGATGAGGATGTCCGCGAAGGTG ATGAACAGCCCCATCCAGTA
Product: geranylgeranyl reductase
Products: NA
Alternate protein names: DGGGPL reductase 1; 2,3-di-O-geranylgeranylglyceryl phosphate reductase 1; Geranylgeranyl reductase 1; GGR 1 [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKTRADVVVVGAGPAGSAAAAWAARAGRDVLVIDSARFPRDKACGDGLTPRAVAELERLGLGPWLDTRIRHRGLRMSGFG AAVEVAWPGPSFPSTGSAVPRTELDDRIRSVAADDGAKMLLGTKAVGVEHDSSGRVETLTLDSGEEVGVGTLIVADGARS TLGRALGRQWHQQTVYGVAVRGYLASPRSDEPWITSHLELRSPEGKVLPGYGWIFPLGNGEVNIGVGALATEKRPADAAL RPLMSHYTALRREEWGFDGEPRAPLSALLPMGGAVSGVAGPNWMLIGDAAACVNPLNGEGIDYGLETGRLAADLLGSSDL SQAWPAVLSDHYARGFSVARRLALLLTLPRFLPLTGPVAMRSTALMRIAVRVMGNLVTDEDADWIARVWRAGGLASRGLD ARKPFS
Sequences:
>Translated_406_residues MKTRADVVVVGAGPAGSAAAAWAARAGRDVLVIDSARFPRDKACGDGLTPRAVAELERLGLGPWLDTRIRHRGLRMSGFG AAVEVAWPGPSFPSTGSAVPRTELDDRIRSVAADDGAKMLLGTKAVGVEHDSSGRVETLTLDSGEEVGVGTLIVADGARS TLGRALGRQWHQQTVYGVAVRGYLASPRSDEPWITSHLELRSPEGKVLPGYGWIFPLGNGEVNIGVGALATEKRPADAAL RPLMSHYTALRREEWGFDGEPRAPLSALLPMGGAVSGVAGPNWMLIGDAAACVNPLNGEGIDYGLETGRLAADLLGSSDL SQAWPAVLSDHYARGFSVARRLALLLTLPRFLPLTGPVAMRSTALMRIAVRVMGNLVTDEDADWIARVWRAGGLASRGLD ARKPFS >Mature_406_residues MKTRADVVVVGAGPAGSAAAAWAARAGRDVLVIDSARFPRDKACGDGLTPRAVAELERLGLGPWLDTRIRHRGLRMSGFG AAVEVAWPGPSFPSTGSAVPRTELDDRIRSVAADDGAKMLLGTKAVGVEHDSSGRVETLTLDSGEEVGVGTLIVADGARS TLGRALGRQWHQQTVYGVAVRGYLASPRSDEPWITSHLELRSPEGKVLPGYGWIFPLGNGEVNIGVGALATEKRPADAAL RPLMSHYTALRREEWGFDGEPRAPLSALLPMGGAVSGVAGPNWMLIGDAAACVNPLNGEGIDYGLETGRLAADLLGSSDL SQAWPAVLSDHYARGFSVARRLALLLTLPRFLPLTGPVAMRSTALMRIAVRVMGNLVTDEDADWIARVWRAGGLASRGLD ARKPFS
Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR011777 - InterPro: IPR003042 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 42889; Mature: 42889
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRADVVVVGAGPAGSAAAAWAARAGRDVLVIDSARFPRDKACGDGLTPRAVAELERLG CCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHC LGPWLDTRIRHRGLRMSGFGAAVEVAWPGPSFPSTGSAVPRTELDDRIRSVAADDGAKML CCCCHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE LGTKAVGVEHDSSGRVETLTLDSGEEVGVGTLIVADGARSTLGRALGRQWHQQTVYGVAV EEEEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEE RGYLASPRSDEPWITSHLELRSPEGKVLPGYGWIFPLGNGEVNIGVGALATEKRPADAAL EEEECCCCCCCCCEEEEEEEECCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCHHHHH RPLMSHYTALRREEWGFDGEPRAPLSALLPMGGAVSGVAGPNWMLIGDAAACVNPLNGEG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHCCCCCCCC IDYGLETGRLAADLLGSSDLSQAWPAVLSDHYARGFSVARRLALLLTLPRFLPLTGPVAM CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RSTALMRIAVRVMGNLVTDEDADWIARVWRAGGLASRGLDARKPFS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCC >Mature Secondary Structure MKTRADVVVVGAGPAGSAAAAWAARAGRDVLVIDSARFPRDKACGDGLTPRAVAELERLG CCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHC LGPWLDTRIRHRGLRMSGFGAAVEVAWPGPSFPSTGSAVPRTELDDRIRSVAADDGAKML CCCCHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE LGTKAVGVEHDSSGRVETLTLDSGEEVGVGTLIVADGARSTLGRALGRQWHQQTVYGVAV EEEEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEE RGYLASPRSDEPWITSHLELRSPEGKVLPGYGWIFPLGNGEVNIGVGALATEKRPADAAL EEEECCCCCCCCCEEEEEEEECCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCHHHHH RPLMSHYTALRREEWGFDGEPRAPLSALLPMGGAVSGVAGPNWMLIGDAAACVNPLNGEG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHCCCCCCCC IDYGLETGRLAADLLGSSDLSQAWPAVLSDHYARGFSVARRLALLLTLPRFLPLTGPVAM CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RSTALMRIAVRVMGNLVTDEDADWIARVWRAGGLASRGLDARKPFS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA