| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866665
Identifier: 119866665
GI number: 119866665
Start: 664954
End: 666414
Strand: Direct
Name: 119866665
Synonym: Mkms_0611
Alternate gene names: NA
Gene position: 664954-666414 (Clockwise)
Preceding gene: 119866664
Following gene: 119866666
Centisome position: 11.59
GC content: 73.17
Gene sequence:
>1461_bases GTGACGGCCCCGGCGCCACAACCGCAATGGCTGCGGTTGAGCCCCCGCATGCTGCTGGTCCATCCGGTGCACGAGGTGCT GCGGCAGGTTCCGGTGCTGATCGGGTCGGTGGTGCTCGGCTCCGCGACCGGCAATCCGTGGTGGGCGGTCGCCGCCCTGG TGGGGACGGTCGGCGTCGGGATCGCGCGGTGGTTCACCACGACCTACCGGATCGACGCCGAGGAGGTGCAGCTTCGCGCA GGTGTCCTGCAACGCCGGGTCCTGTCGGTGCCGCGCAACAGGATTCGGTCGGTCTCCACCGATGCCCGCCTGCTGCACCG GGTACTCGGCCTGGCCGTGCTGCGCGTGAGCACCGGACAGGAGGCGCGCGGTGACGACGCGTTCGCGCTCGACGCCGTCG AGGCCGCCCAGGTCCCGCATCTGCGGGCCGAACTGCTGGCCGAGTCGCTGACCATCGCCGCCGATCCCGAACACCGGGGA CGGGTGCTGGCCCGCTGGCAGCCGGCGTGGCTGCGGTACAGCCCGCTCAGCTTCACCGGTCTGGCGATGATCGCCGCCGC GGCGGGTCTGCTGTACCAGGCGGGAGCCGGTGTGCTGCTGCGGGATTCGAGCCTGGCCGAGGGCGGACGCGGCGTCGCCG AGCGGTTCGGCGTTGCGGCGACCGTGGCCGTCGTCGTACTGGCCGTGCTGGTCGGGTCCGTGGTGCTGTCGGTGCTCCGG TCCCTGGTGACGTACGGAAACCTGTTGTTGTGGCGCGACGGTGAGGTGCTGCATCTCGAACACGGTCTGCTGCGTCGACA GGAACACACCTACGACATGCGCCGGCTCCGCGGCGGCACGTTGCGGGAGCCGCTGTTGGTCAGGGCGTTCGGTGGTGCGC GGCTGGACGCGGTGATGACCGGGGTGGGCGGTGAGGGCGAGGCGTCGTTGTTGTTGCCGCCCTGCCCGGCCGCGACGGCC CGGGCGGTGCTCAGTGATCTCATCGCCGATGAGGAGGAGGTCGCCGGACCGCTGCGCAGCCACGGGGTGGCCGCGGCGCG GCGGCGGTGGACCAGGGCGCTCGCCGTGCCGGTGGCAATGGGGGTCGCGCTGGTGGTGGCGACCGTCTTCACGGCGCCGC CGATCTGGCTGTGGGCGGTGTGGGCGGTTCTCGCGGTGTGCTGCGCGCTGCTGGCCGCCGACCGGGTCCGCTCGCTCGGG CACCGGGCCGGCCACGGCTGGCTGGTGGCGCGCACCGGCAGCCTCGAGCGCCGCCGCGACTGCATCGCCGGTCCGGGCAT CATCGGCTGGACGGTGCAACAGACGTTCTTCCAGCGGCGGTCCGGGGTGGCGACGCTGATCGCCGCCACCGCCGCGGGGG AGAAGGCCTACCGGGTCGTCGACGTCCCCGCCGATGCGGCGTGGTCGATCGTCGCGGCGGCGTCGCCGTGGGTGAGGGAT GTCCCCTGGGCGCGTGATTGA
Upstream 100 bases:
>100_bases CGGCCGGGGCCGTGCGCATCGTCGCGCTCGATGCCCCGGTGGCCGAACGGATCGTCGCGCAGCTGACCGACATCGCGGCG CTCGGCGAACAGGATGCGAC
Downstream 100 bases:
>100_bases CCGGGTCCGAGTTGCACGTCGTCGGCCGCGGTTTACTGTCGGCACATGGCGATCGGTGGAGTGCTCTTCGACATCGATGG CGTGCTGGTGACGTCGTGGC
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane Flanked Domain-Containing Protein; Integral Membrane Protein; Transmembrane Protein; Membrane-Flanked Domain
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTAPAPQPQWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRA GVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRG RVLARWQPAWLRYSPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLR SLVTYGNLLLWRDGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATA RAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLG HRAGHGWLVARTGSLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRD VPWARD
Sequences:
>Translated_486_residues MTAPAPQPQWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRA GVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRG RVLARWQPAWLRYSPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLR SLVTYGNLLLWRDGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATA RAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLG HRAGHGWLVARTGSLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRD VPWARD >Mature_485_residues TAPAPQPQWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRAG VLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGR VLARWQPAWLRYSPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRS LVTYGNLLLWRDGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATAR AVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGH RAGHGWLVARTGSLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDV PWARD
Specific function: Unknown
COG id: COG3428
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52081; Mature: 51950
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAPQPQWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVG CCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IARWFTTTYRIDAEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQ HHHHHHHHEEECHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHEECCCC EARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTG CCCCCCCCEEHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEECCCCHHH LAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLR HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVTYGNLLLWRDGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMT HHHHHCCEEEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHC GVGGEGEASLLLPPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAM CCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH GVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH CIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRD HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHC VPWARD CCCCCC >Mature Secondary Structure TAPAPQPQWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVG CCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IARWFTTTYRIDAEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQ HHHHHHHHEEECHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHEECCCC EARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTG CCCCCCCCEEHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEECCCCHHH LAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLR HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVTYGNLLLWRDGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMT HHHHHCCEEEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHC GVGGEGEASLLLPPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAM CCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH GVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH CIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRD HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHC VPWARD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA