Click here to switch to the map view.

The map label for this gene is ydaM [H]

Identifier: 119866601

GI number: 119866601

Start: 598352

End: 599746

Strand: Reverse

Name: ydaM [H]

Synonym: Mkms_0547

Alternate gene names: 119866601

Gene position: 599746-598352 (Counterclockwise)

Preceding gene: 119866602

Following gene: 119866600

Centisome position: 10.45

GC content: 65.52

Gene sequence:

>1395_bases
ATGCATGACCCGGCCGGCACCCTGCTGCCGGCGCACATGTCGGCGCGCGGCCTGCTCGGGCCACGAGCCCTGGCGGTCGT
CACCGCGGTACTCGCCGCGCTCGCGGCGGTCGTCTGGGCGTGGCCTTCGGTCCTCGCGCCGGTGATCACCGGGGTGGTGG
CATTCACCTACCTGGTCTCCACCGTCGACCGCAATTACCTGCTGTTCAAAGGCCTTCGGATGTCGAGCCTCGTGACCGTG
AGCGCCGAGGAGGCAAGGGCGGTCCCCGACGACGACCTCCCCGTCTACACCGTGCTGCTCCCGGTCTACGACGAACCGAC
CATCGTGACCAACCTGATCAACGGCGTCGGCAGACTCGACTACCCGCCGGACAAACTGGAGATCCTCCTGCTCATCGAGG
AGGACGACATCGCCACCCAGGAGGCGCTGTTGGGCGCCGACCTGCAGTCGGCCCGCATCGTGATCGTGCCGCACAGCCTG
CCGAAGACCAAGCCCAAGGCCTGCAATTACGGCATGTCGCTACCCGACCTGCGCGGTGAGTATCTGACGATCTACGACGC
CGAGGACATCCCCGATCCGCTGCAGCTGCGGCGAGCGGTCGCCGCGTTTCGCCGGTTACCCGTCGAGATCGGTTGTCTAC
AGGCGCGATTGGGCTATTTCAACGAACGGCAGAATCTACTCACCAGGTTCTTTTCCCTCGAGTACGACCAGTGGTTCGGG
GTCGTCCTGCCCGCCGTGGAGAACGCCGGGTGTGTGGTGCCCCTCGGAGGGACGTCGAATCACATGTCCGTGCGCGTGTG
GCGCCAGATCGGCGGGTGGGACGAGTTCAACGTCACCGAGGACGCCGACCTCGGCGTGCGGTTGGCGCGCCATGGCTACC
GAACGCTCATCCTCGACTCGATCACCCTCGAGGAAGCCAATTCCGATGTGGTGAACTGGATCCGGCAGCGCTCGCGCTGG
TACAAGGGCTATCTGCAGACCATGCTGGTCCATCTGCGCGCACCCGTGCGGCTCCGGCGCGAACTGGGCACCAAGGGTTT
CCTGCGGTTGATCAACATGACCGGCGGCGTGCCGATGACCAGCGCGCTGAACGTGATCTTCTGGTTCACCCTGTTCGTCT
GGGTGCTCGGCAGACCCGACGCGATCGGCCCACTCTTCCCGCCGGTCACCTATTACGTCTGCCTGCTCCTGCTGCTGATC
TGCGCACCCCTGTCGGTGTTCGCCGGGCTCATCGTCACCGCGGCGCTGGGCAAACCGCAGCTGTGGTGGGCCGCACTGCT
GGCACCGCTGTACTGGATGCTGCAGTCCGTCGCCGCCGTCAAGGCCATCTACCAGCTCTTCGCCCGACCGTCTTTTTGGG
AGAAGACCGTTCACGGTCTCTCCCCTTCTGCCTGA

Upstream 100 bases:

>100_bases
GCAGGAGACGTCGACGACATCGTGCTGCGGGATGCCGTCGCGCTGGGGGCCGAGCTCAACGCCGCCGCCACCGGCCATCC
GGCGGATGGTCTGACGACAG

Downstream 100 bases:

>100_bases
CTCACCCACACACCGAAGGACGCCGATGAAAGTTCTCACCCGCGCCGTCACCGCAGTCGCCGTCGCCGGCCTCGCGCTGG
GCGTATCGGGTCCGCCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MHDPAGTLLPAHMSARGLLGPRALAVVTAVLAALAAVVWAWPSVLAPVITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTV
SAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSL
PKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLLTRFFSLEYDQWFG
VVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVRLARHGYRTLILDSITLEEANSDVVNWIRQRSRW
YKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLI
CAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA

Sequences:

>Translated_464_residues
MHDPAGTLLPAHMSARGLLGPRALAVVTAVLAALAAVVWAWPSVLAPVITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTV
SAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSL
PKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLLTRFFSLEYDQWFG
VVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVRLARHGYRTLILDSITLEEANSDVVNWIRQRSRW
YKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLI
CAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA
>Mature_464_residues
MHDPAGTLLPAHMSARGLLGPRALAVVTAVLAALAAVVWAWPSVLAPVITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTV
SAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSL
PKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLLTRFFSLEYDQWFG
VVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVRLARHGYRTLILDSITLEEANSDVVNWIRQRSRW
YKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLI
CAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 51503; Mature: 51503

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDPAGTLLPAHMSARGLLGPRALAVVTAVLAALAAVVWAWPSVLAPVITGVVAFTYLVS
CCCCCCCEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLD
HHCCCCCEEECCCHHHEEEEEHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCC
YPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKACNYGMSLPDLRGE
CCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLLTRFFSLEYDQWFG
EEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVRLARHGYRTLILDS
HHHHHHCCCCEEEECCCCCCCHHHHEEHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEH
ITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCCHH
SALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVFAGLIVTAALGKPQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MHDPAGTLLPAHMSARGLLGPRALAVVTAVLAALAAVVWAWPSVLAPVITGVVAFTYLVS
CCCCCCCEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLD
HHCCCCCEEECCCHHHEEEEEHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCC
YPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKACNYGMSLPDLRGE
CCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLLTRFFSLEYDQWFG
EEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVRLARHGYRTLILDS
HHHHHHCCCCEEEECCCCCCCHHHHEEHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEH
ITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCCHH
SALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVFAGLIVTAALGKPQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]