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The map label for this gene is ndoR [H]

Identifier: 119866535

GI number: 119866535

Start: 532238

End: 533404

Strand: Reverse

Name: ndoR [H]

Synonym: Mkms_0481

Alternate gene names: 119866535

Gene position: 533404-532238 (Counterclockwise)

Preceding gene: 119866536

Following gene: 119866534

Centisome position: 9.3

GC content: 70.27

Gene sequence:

>1167_bases
GTGGGACTCGACGACCGTGACGCGCTGGCGGTACTGCGCGACGCGGTCGATCCCCGTCGCGGCTCCGACCCCCTGATCGC
CGACTTCTACACCCGCTGGTTCGCCGCCGACCTCTCGGTGCGCGACCTGTTCCCGCCGGACATGGCCCGCCAGCGCACCG
CCTTCGCCGAAGCGATGACCTGGCTGTTCGGCGAACTGATCGCCCAGCGCGCCGAAGAGCCCGTGGCGTTCCTGGCCCAA
CTCGGCCGCGACCACCGCAAATACGGTGTGGTGCAACGGCATTACGACACCATGGGTGACGCGCTGTACGCCGCGCTGCG
CAGCGGGCTCGCCGACCAGTGGTCCGATCGGGTGGCCGAGGCCGCCCACGACGCCGTCGCCCTGGCCACCGGGGTGATGC
GCGGCGCCGCGGACGCCGAAGAGGGCCCGCCGTTCTGCGACGGCACCGTCATCGAGCACATCCGCGCCACCCGCGACGTA
TCCGTGGTGCGGTTGAAACTCGACCAGCCGCTGGCCTACCACCCGGGTCAGTACGTCACCGTCCAGGTGCCGCAGTGGCC
GCGGCGCTGGCGGTACTTCAGCCCCGCGATCCCCGCCGATCCGGACGGGTACGTCGAATTCCACATCCGTTCGGTGCCCG
GCGGCATGGTGAGCACCGCGATCGTCAACGAGACCCGGGTCGGTGACCGCTGGCGGGTGTCGAACCCTCACGGCGCACTG
GCCGTCGACCGCGACGGCGGCGACGTGCTGATGGTCGCGGGCAGCACCGGCCTGGCCCCGTTGCGGACGCTGATCATGGA
TATGACCCGATTCGGGGTGAACCCGCGCGTACACCTGTTCTTCGGGGGACGGTTCCCGTGCGATCTGTACGACCTCATGA
CGCTGTGGCAGATCGCCTCGACCAATCCGTGGCTGTCGGTGACGCCGGTGTCGGAGTACAGCAGCGATCCGCCGTGGGCG
GCCGACTATCCCGACCCGTCGCCGCCGCGGGGGCTGCACGTCCGCCAGACCGGGCGACTCGACGAGGTGGTCACCCGCTA
CGGCAACTGGGGTGACCGGCAGATCCTGATCTGCGGCGGGGTGGCGATGACCGAGGCCACCAAGGCCGCGCTGATCGCCA
AAGGCGCTCCACCCGAACGCATTCAGCACGACCCGCTGACCACCTGA

Upstream 100 bases:

>100_bases
GTCGTGGCGATCTGCTGGGCGGCGGCCGGCGCGGTACTCGTCGCCCTGGCTGCGCTGCGAGAACGGGCGCGCACAGGGGA
CTGACTTACACTCGCACGAC

Downstream 100 bases:

>100_bases
CCACAGCGCCGGGCCACCGGGCGGCCGTACCGTGCCACACTGGCGACGTGGCCGAACACCAACCCGTCACCCTGAGCGAC
CCGTCGTCCTCGGTGACCGC

Product: oxidoreductase FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGLDDRDALAVLRDAVDPRRGSDPLIADFYTRWFAADLSVRDLFPPDMARQRTAFAEAMTWLFGELIAQRAEEPVAFLAQ
LGRDHRKYGVVQRHYDTMGDALYAALRSGLADQWSDRVAEAAHDAVALATGVMRGAADAEEGPPFCDGTVIEHIRATRDV
SVVRLKLDQPLAYHPGQYVTVQVPQWPRRWRYFSPAIPADPDGYVEFHIRSVPGGMVSTAIVNETRVGDRWRVSNPHGAL
AVDRDGGDVLMVAGSTGLAPLRTLIMDMTRFGVNPRVHLFFGGRFPCDLYDLMTLWQIASTNPWLSVTPVSEYSSDPPWA
ADYPDPSPPRGLHVRQTGRLDEVVTRYGNWGDRQILICGGVAMTEATKAALIAKGAPPERIQHDPLTT

Sequences:

>Translated_388_residues
MGLDDRDALAVLRDAVDPRRGSDPLIADFYTRWFAADLSVRDLFPPDMARQRTAFAEAMTWLFGELIAQRAEEPVAFLAQ
LGRDHRKYGVVQRHYDTMGDALYAALRSGLADQWSDRVAEAAHDAVALATGVMRGAADAEEGPPFCDGTVIEHIRATRDV
SVVRLKLDQPLAYHPGQYVTVQVPQWPRRWRYFSPAIPADPDGYVEFHIRSVPGGMVSTAIVNETRVGDRWRVSNPHGAL
AVDRDGGDVLMVAGSTGLAPLRTLIMDMTRFGVNPRVHLFFGGRFPCDLYDLMTLWQIASTNPWLSVTPVSEYSSDPPWA
ADYPDPSPPRGLHVRQTGRLDEVVTRYGNWGDRQILICGGVAMTEATKAALIAKGAPPERIQHDPLTT
>Mature_387_residues
GLDDRDALAVLRDAVDPRRGSDPLIADFYTRWFAADLSVRDLFPPDMARQRTAFAEAMTWLFGELIAQRAEEPVAFLAQL
GRDHRKYGVVQRHYDTMGDALYAALRSGLADQWSDRVAEAAHDAVALATGVMRGAADAEEGPPFCDGTVIEHIRATRDVS
VVRLKLDQPLAYHPGQYVTVQVPQWPRRWRYFSPAIPADPDGYVEFHIRSVPGGMVSTAIVNETRVGDRWRVSNPHGALA
VDRDGGDVLMVAGSTGLAPLRTLIMDMTRFGVNPRVHLFFGGRFPCDLYDLMTLWQIASTNPWLSVTPVSEYSSDPPWAA
DYPDPSPPRGLHVRQTGRLDEVVTRYGNWGDRQILICGGVAMTEATKAALIAKGAPPERIQHDPLTT

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=224, Percent_Identity=26.7857142857143, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 42945; Mature: 42814

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLDDRDALAVLRDAVDPRRGSDPLIADFYTRWFAADLSVRDLFPPDMARQRTAFAEAMT
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH
WLFGELIAQRAEEPVAFLAQLGRDHRKYGVVQRHYDTMGDALYAALRSGLADQWSDRVAE
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AAHDAVALATGVMRGAADAEEGPPFCDGTVIEHIRATRDVSVVRLKLDQPLAYHPGQYVT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEE
VQVPQWPRRWRYFSPAIPADPDGYVEFHIRSVPGGMVSTAIVNETRVGDRWRVSNPHGAL
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCE
AVDRDGGDVLMVAGSTGLAPLRTLIMDMTRFGVNPRVHLFFGGRFPCDLYDLMTLWQIAS
EEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHC
TNPWLSVTPVSEYSSDPPWAADYPDPSPPRGLHVRQTGRLDEVVTRYGNWGDRQILICGG
CCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEECC
VAMTEATKAALIAKGAPPERIQHDPLTT
CHHHHHHHHHEEECCCCHHHCCCCCCCC
>Mature Secondary Structure 
GLDDRDALAVLRDAVDPRRGSDPLIADFYTRWFAADLSVRDLFPPDMARQRTAFAEAMT
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH
WLFGELIAQRAEEPVAFLAQLGRDHRKYGVVQRHYDTMGDALYAALRSGLADQWSDRVAE
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AAHDAVALATGVMRGAADAEEGPPFCDGTVIEHIRATRDVSVVRLKLDQPLAYHPGQYVT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEE
VQVPQWPRRWRYFSPAIPADPDGYVEFHIRSVPGGMVSTAIVNETRVGDRWRVSNPHGAL
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCE
AVDRDGGDVLMVAGSTGLAPLRTLIMDMTRFGVNPRVHLFFGGRFPCDLYDLMTLWQIAS
EEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHC
TNPWLSVTPVSEYSSDPPWAADYPDPSPPRGLHVRQTGRLDEVVTRYGNWGDRQILICGG
CCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEECC
VAMTEATKAALIAKGAPPERIQHDPLTT
CHHHHHHHHHEEECCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]