| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866490
Identifier: 119866490
GI number: 119866490
Start: 479962
End: 481254
Strand: Reverse
Name: 119866490
Synonym: Mkms_0436
Alternate gene names: NA
Gene position: 481254-479962 (Counterclockwise)
Preceding gene: 119866501
Following gene: 119866489
Centisome position: 8.39
GC content: 69.61
Gene sequence:
>1293_bases ATGTCCTCGAATGCTTCGTCCGGCGCGGTGGCGCTGTTGCCGAAGGAGCGTCTGGAGGTGCTGTTCGAGGAGGTGGCGGA GTTGGCGGGTCAGCGCAACGCCATCGATGCACGGCTGGTGGAGATCGCCGCGGAGATCGATCACGACGGGTTGGGTGGGA TCACCGGGGCGAAGTCGGTGGCGCATTTGATGGCCTGGAAAACCGGGTCCTCGTCGCGGAACGGTAAGACCATCGCCGCG ATCGCCCACCGGATCGCGGAGTTCCCGCGTTGTGTGCAGGCTTTGCGTGACGGGCGGCTGTCGTTGGATCAGGTCGGGGT CATCGCCGAGGGGGCGGGCGCAGGGTCTGATGAGCATTATGCGGAGTTGGCCCGCAGCGCCTCGGTCACCCAGCTCCGCA CCGCGATCAGACTCGAACCCCGCCCCGCCCCCGAGCCCGAAAAGGATGCCGACGGCGAGCCCAAGCCGGTGCCGGTGGCG CAGGCCTCGATCCGCAAGACCAGCGATGAGCAGTACACCTACTGGCGTATCGCCCTGCCCCATGTCGAGGCAGCGGTGTT TGACGCCGCTTTGCGGTCTCATCACGATGCGTTGATCGCGCAGTGGAAACGCGACCACGACACCCCCACCGACACCCCCG CCGGCACTCCCGCCGGTGGCCGCCCACCCATGCCCGCCCTGGCTGATGCGTTCGCCGCGCTGGTCGAGGCCGGCTGGGAT ACCGAGGTGACCCGCCGCCCGCACGGTCAGCGCACCACCGTGGTGGTGCACCTGGACCTCGACGAGCGCATCGCCGCCCT GCATCTGGGTCCGCTGCTGTCGGAGGCCGACCGCCGCTACCTGGGCTGTGACGCCACCTGTGAAGTGTGGTTCGAACGCC ACGGCCAACCCATCGGCGCTGGGCGCACCACCCGCATGATCAGCCGCCGGCTGCGGCGCGCGCTGGAACACCGTCACCGC ACCTGCGCAGTCCCCGGGTGTGGGGCCACCCGCGGTTTGCACGCCCACCACATCCAGCATTGGGAAGACGGCGGAGCCAC CGACCTGGACAACCTCGTGCTGCTGTGTCCCTACCACCACCGGGCCCACCACCGCGGCGTCATCACCATCACCGGACCCG CCGACCAGCTCCCCGTCACCGACAGCACCGGGCGACACCTCACGTCCGGCTCGCTGGCCCGCCCACCCAACCAGCCCCCG CCCACCGTCGCGCCCTACCGCGGACCGTCCGGAGAGCGTGCCGACTGGTGGTGGTACACCCCCTTCCAACCCCCACCACC CACCACCAACTAG
Upstream 100 bases:
>100_bases CCTGCACGCTGGTGAGACAAATGACCGGCTCCGACACACACGGACTGTGGGCCGTCGGGCAACCCGCGGGATTGTCGGAC CCTGGTGCTTGTATGGGGTT
Downstream 100 bases:
>100_bases GCTGCGCGGGAACCGATCTCGCCACGCAGTGCGTCGCTCGATGCTCTGACCCGCAGGGGTGTTCGCCCCAGACGGTCAGC GCGGCCGTCCGATCAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease Domain-Containing Protein; HNH Endonuclease
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSSNASSGAVALLPKERLEVLFEEVAELAGQRNAIDARLVEIAAEIDHDGLGGITGAKSVAHLMAWKTGSSSRNGKTIAA IAHRIAEFPRCVQALRDGRLSLDQVGVIAEGAGAGSDEHYAELARSASVTQLRTAIRLEPRPAPEPEKDADGEPKPVPVA QASIRKTSDEQYTYWRIALPHVEAAVFDAALRSHHDALIAQWKRDHDTPTDTPAGTPAGGRPPMPALADAFAALVEAGWD TEVTRRPHGQRTTVVVHLDLDERIAALHLGPLLSEADRRYLGCDATCEVWFERHGQPIGAGRTTRMISRRLRRALEHRHR TCAVPGCGATRGLHAHHIQHWEDGGATDLDNLVLLCPYHHRAHHRGVITITGPADQLPVTDSTGRHLTSGSLARPPNQPP PTVAPYRGPSGERADWWWYTPFQPPPPTTN
Sequences:
>Translated_430_residues MSSNASSGAVALLPKERLEVLFEEVAELAGQRNAIDARLVEIAAEIDHDGLGGITGAKSVAHLMAWKTGSSSRNGKTIAA IAHRIAEFPRCVQALRDGRLSLDQVGVIAEGAGAGSDEHYAELARSASVTQLRTAIRLEPRPAPEPEKDADGEPKPVPVA QASIRKTSDEQYTYWRIALPHVEAAVFDAALRSHHDALIAQWKRDHDTPTDTPAGTPAGGRPPMPALADAFAALVEAGWD TEVTRRPHGQRTTVVVHLDLDERIAALHLGPLLSEADRRYLGCDATCEVWFERHGQPIGAGRTTRMISRRLRRALEHRHR TCAVPGCGATRGLHAHHIQHWEDGGATDLDNLVLLCPYHHRAHHRGVITITGPADQLPVTDSTGRHLTSGSLARPPNQPP PTVAPYRGPSGERADWWWYTPFQPPPPTTN >Mature_429_residues SSNASSGAVALLPKERLEVLFEEVAELAGQRNAIDARLVEIAAEIDHDGLGGITGAKSVAHLMAWKTGSSSRNGKTIAAI AHRIAEFPRCVQALRDGRLSLDQVGVIAEGAGAGSDEHYAELARSASVTQLRTAIRLEPRPAPEPEKDADGEPKPVPVAQ ASIRKTSDEQYTYWRIALPHVEAAVFDAALRSHHDALIAQWKRDHDTPTDTPAGTPAGGRPPMPALADAFAALVEAGWDT EVTRRPHGQRTTVVVHLDLDERIAALHLGPLLSEADRRYLGCDATCEVWFERHGQPIGAGRTTRMISRRLRRALEHRHRT CAVPGCGATRGLHAHHIQHWEDGGATDLDNLVLLCPYHHRAHHRGVITITGPADQLPVTDSTGRHLTSGSLARPPNQPPP TVAPYRGPSGERADWWWYTPFQPPPPTTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46704; Mature: 46573
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNASSGAVALLPKERLEVLFEEVAELAGQRNAIDARLVEIAAEIDHDGLGGITGAKSV CCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH AHLMAWKTGSSSRNGKTIAAIAHRIAEFPRCVQALRDGRLSLDQVGVIAEGAGAGSDEHY HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEECCCCCCCHHHH AELARSASVTQLRTAIRLEPRPAPEPEKDADGEPKPVPVAQASIRKTSDEQYTYWRIALP HHHHHHCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECC HVEAAVFDAALRSHHDALIAQWKRDHDTPTDTPAGTPAGGRPPMPALADAFAALVEAGWD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC TEVTRRPHGQRTTVVVHLDLDERIAALHLGPLLSEADRRYLGCDATCEVWFERHGQPIGA CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCCC GRTTRMISRRLRRALEHRHRTCAVPGCGATRGLHAHHIQHWEDGGATDLDNLVLLCPYHH CHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHH RAHHRGVITITGPADQLPVTDSTGRHLTSGSLARPPNQPPPTVAPYRGPSGERADWWWYT HHHCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PFQPPPPTTN CCCCCCCCCC >Mature Secondary Structure SSNASSGAVALLPKERLEVLFEEVAELAGQRNAIDARLVEIAAEIDHDGLGGITGAKSV CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH AHLMAWKTGSSSRNGKTIAAIAHRIAEFPRCVQALRDGRLSLDQVGVIAEGAGAGSDEHY HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEECCCCCCCHHHH AELARSASVTQLRTAIRLEPRPAPEPEKDADGEPKPVPVAQASIRKTSDEQYTYWRIALP HHHHHHCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECC HVEAAVFDAALRSHHDALIAQWKRDHDTPTDTPAGTPAGGRPPMPALADAFAALVEAGWD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC TEVTRRPHGQRTTVVVHLDLDERIAALHLGPLLSEADRRYLGCDATCEVWFERHGQPIGA CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCCC GRTTRMISRRLRRALEHRHRTCAVPGCGATRGLHAHHIQHWEDGGATDLDNLVLLCPYHH CHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHH RAHHRGVITITGPADQLPVTDSTGRHLTSGSLARPPNQPPPTVAPYRGPSGERADWWWYT HHHCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PFQPPPPTTN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA