| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866343
Identifier: 119866343
GI number: 119866343
Start: 324732
End: 326168
Strand: Direct
Name: 119866343
Synonym: Mkms_0288
Alternate gene names: NA
Gene position: 324732-326168 (Clockwise)
Preceding gene: 119866342
Following gene: 119866344
Centisome position: 5.66
GC content: 68.96
Gene sequence:
>1437_bases ATGATCGGCCGCACCAAGTCCGCCAAGGTCCTGACCGTCGCGTTGGTGGCGTTGCTCGCCGCCGGCGCCGCGGTGATCGT GCGGCAGGAGTTCTTCGCGCCGCGGACCATCACCGCGTACTTCACCTCGGCCACGTCGATCTACCCCGGTGACGAGGTGC GGGTCGTCGGAGTCCGGGTCGGCACCATCGAATCGATCGAGCCGGTCGGCGAACAGGCCAGGTTCACGCTCGCCGTCGAC CGCGGTGTGTCGATCCCCGCGGACGCCAAGGCGATCATCGTGGCGCCGAATCTGATCGCCGCCCGCTACGTCCAACTCAC CCCGGCCTACGAGTCGAGCGGTCCGGTGCTGCCCGATGACGCCGTCATCGGTGTGGAGCGCACCGCAATACCGGTCGAGT GGGACGAGGTCAAGGAGCAGTTGGCCAGGCTGGCAAGCGAACTCGGCCCGTCCGGTGGAGTGTCCGACACGTCGGTCAGT CGGTTCATCGACAGCGCGGCCAATGCGATGGCCGGCAACGGCGACAAGCTGCGGGAGACCATCTCCCAACTGTCGGGGGT GGGGCGCATCCTCGCCGACGGCAGCGGCAACATCGTCGACGTCATCAAGAACCTGCAGGTCTTCGTGACAGCCCTGCGGG ACAGCAACGTTCAGATCGTCCAGTTCCAGGACCGTCTCGCCACCGTGAGCAGTGTGGTCGACGGCAGTCGGGCGGAGATG GACTCGGCGCTGACCAACCTCGCCGAGGCCGTCGGAGAGGTGCAGCGCTTCATCGCGGGCAGCCGCAATCAGACCGCCGA ACAGATCCAGCGCCTGGCCAACGTGACGCAGAACGTCGCCGACAACCGCGTCGCCCTCGAGAACGTCCTGCACGTCGCGC CGAACGCAATCGGCAACGGGTACAACATCTATCACCCGGACACGGGCACGATGCTCGGCGGGTTCGCGATGGGCAACTTC GCCAACCCGGTACAGCTCATCTGTTCGGCGATCGGCGCGGTCCGCAACGCGACGGCGCCCGAGGCATCGAGGATCTGCGC GGAGTACCTGGGACCCGCCCTTCGCCTGTTGAACTTCAACTACCTGCCCATGCCGATCAACGCGTACCTCAAGAAGTCGC CGAGCCCCGAGAACCTCGTCTATTCGGACCCCGCCCTGGCGCCCGGCGGCGCCGGGGGCAGCCCGACGCCCCCCGAGACG CCCCCGGCGGTGTCCGCCTTCACCGGCGGCGGGGACGTCCCACCCCCCGCGGGGTGGGGGACACCGCCCGGTCCGCCGGG CACATACGCACCCCACGGTCTACCGGCGAACCCGACACCGGCGTTACTCCCGGGCGCACCCATCCCAGCCGGCCCCTCCG CCCCGGCCACGCTGGACGACATGCTGCTTCCCGCGGAGGCACCGCCGTCACCACCGCAGGAAGGCCCACCCGCATGA
Upstream 100 bases:
>100_bases TCGGCTACCGGCGCGGTGTCAATGCCGGCCAGCCTCCGGACAACGCCGGTCCGCGCGCCGAATTCCCGCTCCCCTACAAC GGCATCCCGGGTGGTTCACG
Downstream 100 bases:
>100_bases TCGGCCGCCGTTCGACCCTCCGCGTGGCAGCGGTCGCCGCCTGCGTGACCGTCATCGCCTCCGGGTGCACCTTCGACGGG CTCAACTCGATACCGCTTCC
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; MCE-Family; Virulence Factor MCE-Like Protein; LOW QUALITY PROTEIN Protein
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MIGRTKSAKVLTVALVALLAAGAAVIVRQEFFAPRTITAYFTSATSIYPGDEVRVVGVRVGTIESIEPVGEQARFTLAVD RGVSIPADAKAIIVAPNLIAARYVQLTPAYESSGPVLPDDAVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVS RFIDSAANAMAGNGDKLRETISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSVVDGSRAEM DSALTNLAEAVGEVQRFIAGSRNQTAEQIQRLANVTQNVADNRVALENVLHVAPNAIGNGYNIYHPDTGTMLGGFAMGNF ANPVQLICSAIGAVRNATAPEASRICAEYLGPALRLLNFNYLPMPINAYLKKSPSPENLVYSDPALAPGGAGGSPTPPET PPAVSAFTGGGDVPPPAGWGTPPGPPGTYAPHGLPANPTPALLPGAPIPAGPSAPATLDDMLLPAEAPPSPPQEGPPA
Sequences:
>Translated_478_residues MIGRTKSAKVLTVALVALLAAGAAVIVRQEFFAPRTITAYFTSATSIYPGDEVRVVGVRVGTIESIEPVGEQARFTLAVD RGVSIPADAKAIIVAPNLIAARYVQLTPAYESSGPVLPDDAVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVS RFIDSAANAMAGNGDKLRETISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSVVDGSRAEM DSALTNLAEAVGEVQRFIAGSRNQTAEQIQRLANVTQNVADNRVALENVLHVAPNAIGNGYNIYHPDTGTMLGGFAMGNF ANPVQLICSAIGAVRNATAPEASRICAEYLGPALRLLNFNYLPMPINAYLKKSPSPENLVYSDPALAPGGAGGSPTPPET PPAVSAFTGGGDVPPPAGWGTPPGPPGTYAPHGLPANPTPALLPGAPIPAGPSAPATLDDMLLPAEAPPSPPQEGPPA >Mature_478_residues MIGRTKSAKVLTVALVALLAAGAAVIVRQEFFAPRTITAYFTSATSIYPGDEVRVVGVRVGTIESIEPVGEQARFTLAVD RGVSIPADAKAIIVAPNLIAARYVQLTPAYESSGPVLPDDAVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVS RFIDSAANAMAGNGDKLRETISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSVVDGSRAEM DSALTNLAEAVGEVQRFIAGSRNQTAEQIQRLANVTQNVADNRVALENVLHVAPNAIGNGYNIYHPDTGTMLGGFAMGNF ANPVQLICSAIGAVRNATAPEASRICAEYLGPALRLLNFNYLPMPINAYLKKSPSPENLVYSDPALAPGGAGGSPTPPET PPAVSAFTGGGDVPPPAGWGTPPGPPGTYAPHGLPANPTPALLPGAPIPAGPSAPATLDDMLLPAEAPPSPPQEGPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49344; Mature: 49344
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRTKSAKVLTVALVALLAAGAAVIVRQEFFAPRTITAYFTSATSIYPGDEVRVVGVRV CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCEECCCCCEEEEEEEE GTIESIEPVGEQARFTLAVDRGVSIPADAKAIIVAPNLIAARYVQLTPAYESSGPVLPDD CCCHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHEEEECCCCCCCCCCCCC AVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVSRFIDSAANAMAGNGDKLRET CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH ISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSVVDGSRAEM HHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHH DSALTNLAEAVGEVQRFIAGSRNQTAEQIQRLANVTQNVADNRVALENVLHVAPNAIGNG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC YNIYHPDTGTMLGGFAMGNFANPVQLICSAIGAVRNATAPEASRICAEYLGPALRLLNFN CEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC YLPMPINAYLKKSPSPENLVYSDPALAPGGAGGSPTPPETPPAVSAFTGGGDVPPPAGWG CCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC TPPGPPGTYAPHGLPANPTPALLPGAPIPAGPSAPATLDDMLLPAEAPPSPPQEGPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIGRTKSAKVLTVALVALLAAGAAVIVRQEFFAPRTITAYFTSATSIYPGDEVRVVGVRV CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCEECCCCCEEEEEEEE GTIESIEPVGEQARFTLAVDRGVSIPADAKAIIVAPNLIAARYVQLTPAYESSGPVLPDD CCCHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHEEEECCCCCCCCCCCCC AVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVSRFIDSAANAMAGNGDKLRET CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH ISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSVVDGSRAEM HHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHH DSALTNLAEAVGEVQRFIAGSRNQTAEQIQRLANVTQNVADNRVALENVLHVAPNAIGNG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC YNIYHPDTGTMLGGFAMGNFANPVQLICSAIGAVRNATAPEASRICAEYLGPALRLLNFN CEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC YLPMPINAYLKKSPSPENLVYSDPALAPGGAGGSPTPPETPPAVSAFTGGGDVPPPAGWG CCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC TPPGPPGTYAPHGLPANPTPALLPGAPIPAGPSAPATLDDMLLPAEAPPSPPQEGPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA