Click here to switch to the map view.

The map label for this gene is yafJ [C]

Identifier: 119866299

GI number: 119866299

Start: 268306

End: 269100

Strand: Direct

Name: yafJ [C]

Synonym: Mkms_0244

Alternate gene names: 119866299

Gene position: 268306-269100 (Clockwise)

Preceding gene: 119866294

Following gene: 119866300

Centisome position: 4.68

GC content: 71.45

Gene sequence:

>795_bases
ATGTGTCGGCTGCTGGGTGTGGTGTCTGCCGTTCCGGTGTCGGTTTCGGACGCGGTCGGTGCGCCGACGCTGAAGGATTT
CGTCGCGCTGACCAAGATCCACGGCGACGGATGGGGCGTCGCCGCCGTCGAAGAGGCCGGTCGGTCCCCGCGCGTCGAGG
TCTCGGCGGGCAGCGCACTCGACGACCCGGCATTCGACGCGGCCACCGCCGAGCGCCGCGCGGTGGCGAGCATGGTCCAC
CTGCGCTGGGCCACCAACGGCCTCGCGGTGCGCCCCGAGAACTCCCACCCGTTCCTCGCGGACGGAATCGCGATGGCGCA
CAACGGGTCCATCAAACCGATGGCGCCGCTGGACGCCCTGCTCGAACCCGGCATCGCCGCGACGCTGCGGGGCACCACCG
ACAGTGAGCGCTACTTCGCCCTGATCCGTCAGCACCGCCGGACCGCACCGACGCTCGCGGAGGCGGTGCGCCGCGCCGTG
TCCGAGCTACGCGACCGCTATCCGGAGGCCAGCCTCAACGCGCTGCTGCTCGGTGAGGGCCAACTGGTCGCTGTGCACGC
GCACGCCCGCAGCCGCCTGCCCGCCGAGGACATCGAGGAGATCACCGCGGCCGACCTGCCGACCGAACATCTCGAGGACT
ACTTCGCGTTGCGCTGGGCGAGGCCCGACGACGGCACCCTGGTCATCGGGTCGACGGGCTTCGGCGACCTCGACTGGCAG
CCACTGCCCCCCGAGTGCGTCACGGCGGTGTCGATCGACGATCGGTCGATGACCCTGCACCCGCTCGGTCCGTGA

Upstream 100 bases:

>100_bases
GGTCGAGTCTTCGGGAACCCTATGTCATGAATGTTTCAAGTTCTTTAAAATCAGTCCACCGCGATTGATTCGTTAAATCC
GCTGTTGGGAGGATGCCGGT

Downstream 100 bases:

>100_bases
CAGATTGACACCATGCCATCTCCCACCGGTGAGACCGTGGCCGCGTTGGCCGCCGCCGCGCTGCCGGCGTTGTCGCGCGC
CGAACGGCGGGTGGGTCGGG

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: Glutamine Amidotransferase; Class II Glutamine Amidotransferase Domain Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MCRLLGVVSAVPVSVSDAVGAPTLKDFVALTKIHGDGWGVAAVEEAGRSPRVEVSAGSALDDPAFDAATAERRAVASMVH
LRWATNGLAVRPENSHPFLADGIAMAHNGSIKPMAPLDALLEPGIAATLRGTTDSERYFALIRQHRRTAPTLAEAVRRAV
SELRDRYPEASLNALLLGEGQLVAVHAHARSRLPAEDIEEITAADLPTEHLEDYFALRWARPDDGTLVIGSTGFGDLDWQ
PLPPECVTAVSIDDRSMTLHPLGP

Sequences:

>Translated_264_residues
MCRLLGVVSAVPVSVSDAVGAPTLKDFVALTKIHGDGWGVAAVEEAGRSPRVEVSAGSALDDPAFDAATAERRAVASMVH
LRWATNGLAVRPENSHPFLADGIAMAHNGSIKPMAPLDALLEPGIAATLRGTTDSERYFALIRQHRRTAPTLAEAVRRAV
SELRDRYPEASLNALLLGEGQLVAVHAHARSRLPAEDIEEITAADLPTEHLEDYFALRWARPDDGTLVIGSTGFGDLDWQ
PLPPECVTAVSIDDRSMTLHPLGP
>Mature_264_residues
MCRLLGVVSAVPVSVSDAVGAPTLKDFVALTKIHGDGWGVAAVEEAGRSPRVEVSAGSALDDPAFDAATAERRAVASMVH
LRWATNGLAVRPENSHPFLADGIAMAHNGSIKPMAPLDALLEPGIAATLRGTTDSERYFALIRQHRRTAPTLAEAVRRAV
SELRDRYPEASLNALLLGEGQLVAVHAHARSRLPAEDIEEITAADLPTEHLEDYFALRWARPDDGTLVIGSTGFGDLDWQ
PLPPECVTAVSIDDRSMTLHPLGP

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28183; Mature: 28183

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRLLGVVSAVPVSVSDAVGAPTLKDFVALTKIHGDGWGVAAVEEAGRSPRVEVSAGSAL
CCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHEEECCCCCCHHHHHCCCCCEEEEECCCCC
DDPAFDAATAERRAVASMVHLRWATNGLAVRPENSHPFLADGIAMAHNGSIKPMAPLDAL
CCCCCCHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCHHCCEEEECCCCCCCCCHHHHH
LEPGIAATLRGTTDSERYFALIRQHRRTAPTLAEAVRRAVSELRDRYPEASLNALLLGEG
HCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
QLVAVHAHARSRLPAEDIEEITAADLPTEHLEDYFALRWARPDDGTLVIGSTGFGDLDWQ
CEEEEEECHHCCCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCC
PLPPECVTAVSIDDRSMTLHPLGP
CCCHHHEEEEEECCCCEEEECCCC
>Mature Secondary Structure
MCRLLGVVSAVPVSVSDAVGAPTLKDFVALTKIHGDGWGVAAVEEAGRSPRVEVSAGSAL
CCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHEEECCCCCCHHHHHCCCCCEEEEECCCCC
DDPAFDAATAERRAVASMVHLRWATNGLAVRPENSHPFLADGIAMAHNGSIKPMAPLDAL
CCCCCCHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCHHCCEEEECCCCCCCCCHHHHH
LEPGIAATLRGTTDSERYFALIRQHRRTAPTLAEAVRRAVSELRDRYPEASLNALLLGEG
HCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
QLVAVHAHARSRLPAEDIEEITAADLPTEHLEDYFALRWARPDDGTLVIGSTGFGDLDWQ
CEEEEEECHHCCCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCC
PLPPECVTAVSIDDRSMTLHPLGP
CCCHHHEEEEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA