| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866293
Identifier: 119866293
GI number: 119866293
Start: 260863
End: 261381
Strand: Reverse
Name: 119866293
Synonym: Mkms_0238
Alternate gene names: NA
Gene position: 261381-260863 (Counterclockwise)
Preceding gene: 119866295
Following gene: 119866292
Centisome position: 4.56
GC content: 71.29
Gene sequence:
>519_bases ATGACCGCCCACGCCGACGTCTCGGCCCGGGAGTCAGTCTCAGAGGTCCACCGGCAGGTCGGCCAGGAGATCATGGTGAT CGCCTACGACGGCACCGCCAACGCCCGTCGTGCGGTGCACTATGCGGGACGGTTCCTGTCCGCGAACCGCGCGGTGGTGC TCACGGTGTGGTCGCCCACGCTGCGCGGATCGGAGCCACCCGCGGTGGATCTCGACGGTCCGCCGGATCCGGCGCCCGAC GACGACGAGGACATCGCCTACGCCGACGCCCAGCGCACCAACGCCGAGGGAATCGAGTTGGCCCGGGCCGCCGGCCTGTC CGCCGAGGCGATGTGCGTGGCCGCGACCAGCACCGTGTGGAACACCATCATCGAGACCGCGGACACGTTGGACGCGGATC TGATCGTCACCGGAACCCGCGGCACCACCGGGCTGCGCTCTTTGCTGCAGTCCAGCGTCGCCGACCGGGTGCTGCGTCAC GGGCACCGGCCGGTGCTCATCGTGCCGCCGGGCCGCTGA
Upstream 100 bases:
>100_bases GTGCACACAGTCCTCGGGTCCAAGCCATGGGCTCTGACACTAACGGCTCCGGCGACGCGGGTCGATGCCATAGGGTCGAA GGGGACCACGAGGAGGTGCG
Downstream 100 bases:
>100_bases CCGGCCGCGTGCTAGTTTTGGCGCCATGGATCGGTTCATCGTCCCCGCCGCGGCCAGCATCGTCGTGGGCCTGCTGCTCG GGGCGGCGGCCGTGTTCGGG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Family Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTAHADVSARESVSEVHRQVGQEIMVIAYDGTANARRAVHYAGRFLSANRAVVLTVWSPTLRGSEPPAVDLDGPPDPAPD DDEDIAYADAQRTNAEGIELARAAGLSAEAMCVAATSTVWNTIIETADTLDADLIVTGTRGTTGLRSLLQSSVADRVLRH GHRPVLIVPPGR
Sequences:
>Translated_172_residues MTAHADVSARESVSEVHRQVGQEIMVIAYDGTANARRAVHYAGRFLSANRAVVLTVWSPTLRGSEPPAVDLDGPPDPAPD DDEDIAYADAQRTNAEGIELARAAGLSAEAMCVAATSTVWNTIIETADTLDADLIVTGTRGTTGLRSLLQSSVADRVLRH GHRPVLIVPPGR >Mature_171_residues TAHADVSARESVSEVHRQVGQEIMVIAYDGTANARRAVHYAGRFLSANRAVVLTVWSPTLRGSEPPAVDLDGPPDPAPDD DEDIAYADAQRTNAEGIELARAAGLSAEAMCVAATSTVWNTIIETADTLDADLIVTGTRGTTGLRSLLQSSVADRVLRHG HRPVLIVPPGR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18234; Mature: 18102
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHADVSARESVSEVHRQVGQEIMVIAYDGTANARRAVHYAGRFLSANRAVVLTVWSPT CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCC LRGSEPPAVDLDGPPDPAPDDDEDIAYADAQRTNAEGIELARAAGLSAEAMCVAATSTVW CCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEHHHHHH NTIIETADTLDADLIVTGTRGTTGLRSLLQSSVADRVLRHGHRPVLIVPPGR HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC >Mature Secondary Structure TAHADVSARESVSEVHRQVGQEIMVIAYDGTANARRAVHYAGRFLSANRAVVLTVWSPT CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCC LRGSEPPAVDLDGPPDPAPDDDEDIAYADAQRTNAEGIELARAAGLSAEAMCVAATSTVW CCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEHHHHHH NTIIETADTLDADLIVTGTRGTTGLRSLLQSSVADRVLRHGHRPVLIVPPGR HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA