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The map label for this gene is mmgC [H]

Identifier: 119866279

GI number: 119866279

Start: 240992

End: 242218

Strand: Reverse

Name: mmgC [H]

Synonym: Mkms_0223

Alternate gene names: 119866279

Gene position: 242218-240992 (Counterclockwise)

Preceding gene: 119866282

Following gene: 119866278

Centisome position: 4.22

GC content: 71.48

Gene sequence:

>1227_bases
ATGGCCGCCGCCCACCCACAGGGACATGACAATTCCTGCTGCGTCCGCGCTCACTACACTCCACCGCCAGTGGGTGAATT
AGAGGCGCTGTGCGCCAACGACGATGACCTGGCGGCGCTGCGGACGTCGATCCGGGAGTTCCTGGCCGCCGATCGCGCGG
CCCACGGCTGGCAGCCGGCGGTCGACTGCTGGCTGGCGGCGTGGGACCCCGAGTTCAGCGTGCGGCTGGCCGCGGCCGGA
TTTCTCGGGCTGACGATCCCGACCGAGTACGGCGGGCACGGGCTCGGGCATCTACACCGCTACGTCGTGACCGAGGAGCT
GCTCGCGCACGGCGCACCCGTCGCCGCGCACTGGATCGCCGACCGCCAGGTCGCGCCCGGCCTGCTCACGTACGGCACCG
AGGAACAGCGCCGACGGCTGCTGCCCCGCATCGCCGCCGGCCGGCTGTCCTCGGCGATCGGGATGAGCGAACACGGCGCC
GGTTCGGACCTCGCGGCGGTCGCCACCCGCGCCACCGAGGTCGACGGCGGCTGGCGGCTCGACGGTACGAAAGTGTGGAC
CAGCGGAGCCCACGTCGCCGACCAGGTCGTGGTGCTGGCGCGCAGCGCCCCCGTCGACCCCGACCACCGGCACGCAGGGT
TCAGCCAGTTCATCGTCCCCACCGACGCACCCGGGGTGACGATCAGCCCGATCGTGCTGATGAACGGCGAACACCACTTC
AATGAGGTGCTGTTCGACGGCGTGTTCGTCCCGCACGCCGACGTGCTCGGCGAGATCGGGAACGGATGGCATCAGGTGAC
GGCGGAACTCGGGTTCGAACGCAGCGGCCCGGAACGGATCCTGTCGACGGCGACGCTGGTGTTCGAGGCGGTGGCCGCCC
TCGGCCGCGCGGGCGTCGACGACCGCACCGCCGCCGAGGTGGGCGACCTGATGGCCCGGATGGTGTCGCTGCGTCAGCTG
TCCATCTCCGTGGCACGCGAACTCACCGCCGGGCGCGACGCGAACACCAGGGCGGCGCTGGTGAAGGATCTCGGCACCCG
CTTCGAACAGAAGTCGGTGGAGATCGTTGCCGGCCTGCTCACCTCCCTCGACGAGGACGCGCCGGAGGCCGAACGGCTGC
GCGGGCTGCTGGCGACGGGTCGTCTGCATGCGCCGCTGTTCACATTGCGGGGCGGGACGAACGAGGTGTTGCGGGGCGTG
GTCGCCCGCGGGCTGGGGGTGCGATGA

Upstream 100 bases:

>100_bases
GCCGACCTCGGCGTTGGAGACGTCGACGACGGCGTCGAGCAGCTCCCGCAGTCGGTCCCGCCGCGCCGGGTTGGTGGCGT
GCTCACTCACGGATCCGAGT

Downstream 100 bases:

>100_bases
GCGCTTGCGCGAAGAGCCGGGGACTGCGATGAGCGCTTGCGCGAAGAGCCGAGGAAGCAGATGAACGACGAATTACGCCA
ACTGGTCGACGATCTCGCGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAAAHPQGHDNSCCVRAHYTPPPVGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAG
FLGLTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGA
GSDLAAVATRATEVDGGWRLDGTKVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHF
NEVLFDGVFVPHADVLGEIGNGWHQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQL
SISVARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGV
VARGLGVR

Sequences:

>Translated_408_residues
MAAAHPQGHDNSCCVRAHYTPPPVGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAG
FLGLTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGA
GSDLAAVATRATEVDGGWRLDGTKVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHF
NEVLFDGVFVPHADVLGEIGNGWHQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQL
SISVARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGV
VARGLGVR
>Mature_407_residues
AAAHPQGHDNSCCVRAHYTPPPVGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGF
LGLTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAG
SDLAAVATRATEVDGGWRLDGTKVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFN
EVLFDGVFVPHADVLGEIGNGWHQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLS
ISVARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVV
ARGLGVR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958414, Length=352, Percent_Identity=26.7045454545455, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI226958412, Length=353, Percent_Identity=27.1954674220963, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI4557235, Length=349, Percent_Identity=29.2263610315186, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI76496475, Length=349, Percent_Identity=29.2263610315186, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI187960098, Length=342, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557231, Length=342, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4501859, Length=358, Percent_Identity=27.9329608938547, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI21361497, Length=357, Percent_Identity=26.6106442577031, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4501857, Length=383, Percent_Identity=24.5430809399478, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4557233, Length=278, Percent_Identity=26.6187050359712, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI7656849, Length=240, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI87081958, Length=306, Percent_Identity=28.4313725490196, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786223, Length=319, Percent_Identity=25.705329153605, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=391, Percent_Identity=28.3887468030691, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17570075, Length=395, Percent_Identity=25.5696202531646, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=189, Percent_Identity=33.8624338624339, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=186, Percent_Identity=33.8709677419355, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=189, Percent_Identity=30.6878306878307, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=207, Percent_Identity=28.5024154589372, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=188, Percent_Identity=30.8510638297872, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=344, Percent_Identity=25, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=199, Percent_Identity=31.6582914572864, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=199, Percent_Identity=31.6582914572864, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=203, Percent_Identity=26.6009852216749, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=199, Percent_Identity=27.1356783919598, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355753, Length=350, Percent_Identity=26, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=341, Percent_Identity=26.099706744868, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI281363737, Length=358, Percent_Identity=27.0949720670391, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646207, Length=273, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356377, Length=278, Percent_Identity=26.978417266187, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24660351, Length=345, Percent_Identity=24.9275362318841, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43435; Mature: 43303

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAHPQGHDNSCCVRAHYTPPPVGELEALCANDDDLAALRTSIREFLAADRAAHGWQPA
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
VDCWLAAWDPEFSVRLAAAGFLGLTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIA
HHHEEEECCCCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
DRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRL
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEE
DGTKVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHF
CCCEEECCCCHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCCEECEEEEECCCHHH
NEVLFDGVFVPHADVLGEIGNGWHQVTAELGFERSGPERILSTATLVFEAVAALGRAGVD
HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DRTAAEVGDLMARMVSLRQLSISVARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVVARGLGVR
HHCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAAHPQGHDNSCCVRAHYTPPPVGELEALCANDDDLAALRTSIREFLAADRAAHGWQPA
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
VDCWLAAWDPEFSVRLAAAGFLGLTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIA
HHHEEEECCCCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
DRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRL
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEE
DGTKVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHF
CCCEEECCCCHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCCEECEEEEECCCHHH
NEVLFDGVFVPHADVLGEIGNGWHQVTAELGFERSGPERILSTATLVFEAVAALGRAGVD
HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DRTAAEVGDLMARMVSLRQLSISVARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVVARGLGVR
HHCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]