| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866070
Identifier: 119866070
GI number: 119866070
Start: 11295
End: 11867
Strand: Direct
Name: 119866070
Synonym: Mkms_0013
Alternate gene names: NA
Gene position: 11295-11867 (Clockwise)
Preceding gene: 119866069
Following gene: 119866071
Centisome position: 0.2
GC content: 72.08
Gene sequence:
>573_bases ATGAGCGACGACGACCGGGATGGCGACGGCGACCCGATCGGTCCCCCGGCGCACCTGTCCGAGCTCAAGGGAATGGATCT GGTGCGGCGCACCCTCGAAGAAGCCCGCGGGGCGGCGCGCAGCCAGGGTAAGGACGTGGGCCGGGGTCGGACCTCGCCGG CCCGCCGGGTGGCGGGTACGGGACGGCGCCGCAGCTGGTCGGGACCGGGTCCGGATTCCCGCGACCCCCAGACACTCGGT GCGGCGACGCGGGATCTGGCCCGTACCCGGGGCTGGTCACCCAAGGTCGCCGAGGGTGCGGTGTTCGGACAGTGGTCGAC GGTGGTCGGCGAACAGATCGCCGAACACGCCACCCCGAGTTCGTTGCGCGAGGGCGTCCTGACGGTCGCCGCCGAATCGA CCGCCTGGGCCACCCAACTCCGGATGGTGCAGTCGCAGCTTCTGGCGAAGATCGCCGCGGCGGTCGGCGACGGTGTGGTC ACGTCGCTGAAGATCACCGGACCGACGGCGCCGTCGTGGCGGAAAGGCCGTTACCACATCGCGGGCCGCGGCCCGCGCGA TACGTACGGATGA
Upstream 100 bases:
>100_bases CCGCGGCGGTCGCCGAGGACATCCCCGCCGACTGGGATGCGCGGCGGATCATGATCCGGATGCAGGACGACGACGATGGG CGCGTATCGATGGTGGAGTC
Downstream 100 bases:
>100_bases GTCCTCACAACTGTGCGCTCAGAGGCGCGTGGGGTTCCCGGGGCCGTCCCTTCGGCGTCCCGACGCACCGAAGTTCGAGA AATTCCGCGCACGGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLG AATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVV TSLKITGPTAPSWRKGRYHIAGRGPRDTYG
Sequences:
>Translated_190_residues MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLG AATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVV TSLKITGPTAPSWRKGRYHIAGRGPRDTYG >Mature_189_residues SDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLGA ATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVT SLKITGPTAPSWRKGRYHIAGRGPRDTYG
Specific function: Unknown
COG id: COG5512
COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0232 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007922 - InterPro: IPR023007 [H]
Pfam domain/function: PF05258 DUF721 [H]
EC number: NA
Molecular weight: Translated: 20121; Mature: 19989
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGT CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC GRRRSWSGPGPDSRDPQTLGAATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHCCHH SLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVTSLKITGPTAPSWRKGRYHI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE AGRGPRDTYG CCCCCCCCCC >Mature Secondary Structure SDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGT CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC GRRRSWSGPGPDSRDPQTLGAATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHCCHH SLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVTSLKITGPTAPSWRKGRYHI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE AGRGPRDTYG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8878580 [H]