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The map label for this gene is oxaA [H]

Identifier: 119866062

GI number: 119866062

Start: 3441

End: 4544

Strand: Reverse

Name: oxaA [H]

Synonym: Mkms_0005

Alternate gene names: 119866062

Gene position: 4544-3441 (Counterclockwise)

Preceding gene: 119866063

Following gene: 119866061

Centisome position: 0.08

GC content: 66.03

Gene sequence:

>1104_bases
GTGTTTAACTGGTTCAGCCTCGACATCATCTATTACCCGGTGTCGGCGATCATGTGGGTCTGGTACAAGGCGTTCGCCTT
CCTCCTCGGCCCGGACAACTTCTTCGCCTGGGCGCTGTCGGTGATGTTCCTGGTGTTCACGCTGCGCGCGATCCTCTACA
AGCCGTTCGTCCGGCAGATCCGCACCACGCGGCAGATGCAGGAACTGCAGCCCCAGATCAAGGCGCTGCAGAAGAAGTAC
GGCAAGGACCGCCAGCGGATGGCGCTGGAGATGCAGAAGCTGCAGAAGGAACACGGGTTCAACCCGATCCTCGGATGCCT
GCCGATGCTGGCCCAGATCCCGGTGTTCCTGGGTCTCTACCACGTGCTGATGTCCTTCAACCGGACCCAGACCGGCATCG
GCCGGCTGGGTCTGTCGGTGGAGGAGAACCGCAGCCTCCCGAACTATCTGTTCAGCGCGACCGACGTGGGCCACTTCCTC
GACGCCAACCTGTTCGGGGCGCCGCTGGGCGCGACGATGATCCAGCAGCACGGCCTGGAGGCGTTCACCGAATTCAACCG
CGTCGCGGTGGTGGTCGTCGGGGTCCCGATCATGCTGCTGGCGGGTATCGCGACGCACTTCAACAGCCGGGCCTCGGTGG
CCCGCCAGACGCCGGAAGCGGCTGCCAACCCGCAGACCGCGTTGATGAACAAGCTTGCGCTGTACGTGTTCCCGCTAGGT
GTGGTGGTCGGCGGTCCGTTCCTGCCGCTCGCGGTGATCATGTACTGGCTCGCCAACAACATCTGGACCTACGGTCAGCA
GCACTACGTGTTCGGCAAGATCGAGAAGGAAGAAGAGGCCAAGAAGGTCGAGGCGTTGGAGCGCCGCGCCGCGAACGCCC
CGGCGCCCGGCGCCAAGCCCAAGCGCACCCGTAAGGCTCAGGAGGCGGCCGACGCCGGCGCGGATGCGGTCGACGGTTCG
GTGACCGATGCCGCCGGAGCCGACGAGGCGGCCGGTGGGCCCGCGGCGAAGGCGAGCGGGAACGGGGCGGCCAAACCGAG
TGGCGGACAGGCCGTGAGCCGAACGCCCAAGCCGGGAGCCCGGCCCAAGAAACGCAAGCGTTGA

Upstream 100 bases:

>100_bases
GGATGGGACCCGATCCCCGAACGGCCGGACGCGGCGAGCGCGCCGCCCGAAGACCGAAGCGGTGCAGACTTCACCGCCGA
CCCCGTCAGGAGCAAGTCGC

Downstream 100 bases:

>100_bases
CCAGTCGGGGACTGGCGGAAGAGGGAGAGGCAGACATGACCGACGCTGATACGACCGAGCGGACCGAGGACGTCGAGACG
CGGGATGCCGAGGAGATCAC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MFNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKY
GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFL
DANLFGAPLGATMIQQHGLEAFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG
VVVGGPFLPLAVIMYWLANNIWTYGQQHYVFGKIEKEEEAKKVEALERRAANAPAPGAKPKRTRKAQEAADAGADAVDGS
VTDAAGADEAAGGPAAKASGNGAAKPSGGQAVSRTPKPGARPKKRKR

Sequences:

>Translated_367_residues
MFNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKY
GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFL
DANLFGAPLGATMIQQHGLEAFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG
VVVGGPFLPLAVIMYWLANNIWTYGQQHYVFGKIEKEEEAKKVEALERRAANAPAPGAKPKRTRKAQEAADAGADAVDGS
VTDAAGADEAAGGPAAKASGNGAAKPSGGQAVSRTPKPGARPKKRKR
>Mature_367_residues
MFNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKY
GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFL
DANLFGAPLGATMIQQHGLEAFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG
VVVGGPFLPLAVIMYWLANNIWTYGQQHYVFGKIEKEEEAKKVEALERRAANAPAPGAKPKRTRKAQEAADAGADAVDGS
VTDAAGADEAAGGPAAKASGNGAAKPSGGQAVSRTPKPGARPKKRKR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=110, Percent_Identity=36.3636363636364, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 40282; Mature: 40282

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA