Click here to switch to the map view.

The map label for this gene is 119855170

Identifier: 119855170

GI number: 119855170

Start: 299504

End: 300919

Strand: Direct

Name: 119855170

Synonym: Mkms_5785

Alternate gene names: NA

Gene position: 299504-300919 (Clockwise)

Preceding gene: 119855169

Following gene: 119855171

Centisome position: 99.14

GC content: 66.88

Gene sequence:

>1416_bases
ATGAGTGCGACACCGGCCGCCTCCGGCGGCTATCGGCCACCGGTGACCCCGTTCGCCGGCTGGGTCCACGACGACCGCGG
CCGACTCGTGCCGCTGGAGACCGCCCCGCATATCGGCGCGTTCGCCCCGCCGGGCACCGGCAAGACCCGCAAGTGGCTGG
CGCAGTCGGCGGTGCTGTGGCCGGGCCCAGCAGTGGTGTCGTCTTCCAAGGACGACCTCATGCAGATGGTGGCCTCGCGG
CGCTACGGGCCTGCCGCGCTACTGGATCTGCGGCCTATCGCTGCGCCGTACTATCCGGCTGACCTGCGTCCGTACCGGTT
CGATCCCACCGCATGGATCACCGGACTTGAGGATGCTAAGGCCGTCGCCCGCACGTTGTTGAGCACCTCGGCGGTCGCGC
TGTCGGGCAGCTCCTTTCGCGGCAGCGACCCCGGCCCGTGGGATGACCTGGCGTTCGCCCCGCTGACCTGCCTACTGTTG
GCCGCGAGCCCGCAAGGGCTGGGGCTGGGCATCGACTGGGTAATCGAGGCTGCCGAGGACGTGACCCTGCCCAACCCCTG
GCCCACCTCGCCGCAGATGAGCACTGATGCCTCCTGGGTGACCGCGGCCGTCTGGTCGTCCAACCGCTACTTCGAGGCCC
GCGTGCGCAGCGTGTTGAGCATGGAGGCCAAGCAACGCGACTCGGTCAAAATCACCGTGACCAAGGTCCTGACTGCCTGG
CTGCAGACGATGGAACGCGACAGAGGCCTGCCAGTCCTCGATGAGGAGTTCCTGGAGGACCCCAACGCCACCATCTATCT
GCTGACACCCTTTGATGGCACGGTCGCCGCGCAGGCGATCACTCTGATGGATCAGCTGATTAACCGTCAACGCGTGAAAG
TCGCTCAGTGGGACGAGTTTTCCCGGTTGGGCATGTTTCTCGACGAGATCACCAACACGCCTTTGCCGCGGCTGCCGCAA
TACATCGCCGAGTCCCGCGGCCTGGGCGTCTCGCTGTGTTTTGCCGCCCAGGCCGGCGAGCAGCTCGACGCGATCTACGG
CCCGCTGCAGGGGGCGGCGATTCGCGCTGTCGTTCCGGCGTCGCTGCTGATGTACGGCTCCCATGAGAAGGACCTGATGG
AGTCGGCGTCGTTCTGGAGCGGCAAGACCACCCGCAGCCAACTGTCCTACGACCACAGCCTGGATTCGACGTCGACGAGC
CGCACCTTCGGCAATGCCCTTGAGCCTGAGGAACTTATGCCACCCAATGACTCGTTCGCGCGGCTGCTGATCCGCGGCAC
CCCCGGGCGCATGGTCACACTCATCGACTGGACCGAGTTCGTGAAGTACCTCGACGAACTGCGGGCAGCGCGGCTCCACC
ACAGCAGCGGCGGCCGCCAGCGATTCAGCGGCCTCGACGCGGCGGCGACGGCATGA

Upstream 100 bases:

>100_bases
CTGACGTGCGCGCCGGGGAGTACGTCTCACCGCGGCAGGACTAAACAGCGCCCGAAAATAGTGCACGGAGCACCCCTGCG
ACAGCCCTACTGTTCCAACT

Downstream 100 bases:

>100_bases
CGACCGTTGGTGCACAGATGATTCCCGCTGCGTCGCAGGAGACCTCGCTGCGGTCACTGAACGCGCCCGCATCCACGGCA
ACGGCTCTGGCGCGAGCACG

Product: Type IV secretory pathway VirD4 components-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSATPAASGGYRPPVTPFAGWVHDDRGRLVPLETAPHIGAFAPPGTGKTRKWLAQSAVLWPGPAVVSSSKDDLMQMVASR
RYGPAALLDLRPIAAPYYPADLRPYRFDPTAWITGLEDAKAVARTLLSTSAVALSGSSFRGSDPGPWDDLAFAPLTCLLL
AASPQGLGLGIDWVIEAAEDVTLPNPWPTSPQMSTDASWVTAAVWSSNRYFEARVRSVLSMEAKQRDSVKITVTKVLTAW
LQTMERDRGLPVLDEEFLEDPNATIYLLTPFDGTVAAQAITLMDQLINRQRVKVAQWDEFSRLGMFLDEITNTPLPRLPQ
YIAESRGLGVSLCFAAQAGEQLDAIYGPLQGAAIRAVVPASLLMYGSHEKDLMESASFWSGKTTRSQLSYDHSLDSTSTS
RTFGNALEPEELMPPNDSFARLLIRGTPGRMVTLIDWTEFVKYLDELRAARLHHSSGGRQRFSGLDAAATA

Sequences:

>Translated_471_residues
MSATPAASGGYRPPVTPFAGWVHDDRGRLVPLETAPHIGAFAPPGTGKTRKWLAQSAVLWPGPAVVSSSKDDLMQMVASR
RYGPAALLDLRPIAAPYYPADLRPYRFDPTAWITGLEDAKAVARTLLSTSAVALSGSSFRGSDPGPWDDLAFAPLTCLLL
AASPQGLGLGIDWVIEAAEDVTLPNPWPTSPQMSTDASWVTAAVWSSNRYFEARVRSVLSMEAKQRDSVKITVTKVLTAW
LQTMERDRGLPVLDEEFLEDPNATIYLLTPFDGTVAAQAITLMDQLINRQRVKVAQWDEFSRLGMFLDEITNTPLPRLPQ
YIAESRGLGVSLCFAAQAGEQLDAIYGPLQGAAIRAVVPASLLMYGSHEKDLMESASFWSGKTTRSQLSYDHSLDSTSTS
RTFGNALEPEELMPPNDSFARLLIRGTPGRMVTLIDWTEFVKYLDELRAARLHHSSGGRQRFSGLDAAATA
>Mature_470_residues
SATPAASGGYRPPVTPFAGWVHDDRGRLVPLETAPHIGAFAPPGTGKTRKWLAQSAVLWPGPAVVSSSKDDLMQMVASRR
YGPAALLDLRPIAAPYYPADLRPYRFDPTAWITGLEDAKAVARTLLSTSAVALSGSSFRGSDPGPWDDLAFAPLTCLLLA
ASPQGLGLGIDWVIEAAEDVTLPNPWPTSPQMSTDASWVTAAVWSSNRYFEARVRSVLSMEAKQRDSVKITVTKVLTAWL
QTMERDRGLPVLDEEFLEDPNATIYLLTPFDGTVAAQAITLMDQLINRQRVKVAQWDEFSRLGMFLDEITNTPLPRLPQY
IAESRGLGVSLCFAAQAGEQLDAIYGPLQGAAIRAVVPASLLMYGSHEKDLMESASFWSGKTTRSQLSYDHSLDSTSTSR
TFGNALEPEELMPPNDSFARLLIRGTPGRMVTLIDWTEFVKYLDELRAARLHHSSGGRQRFSGLDAAATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51341; Mature: 51210

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPAASGGYRPPVTPFAGWVHDDRGRLVPLETAPHIGAFAPPGTGKTRKWLAQSAVLW
CCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEC
PGPAVVSSSKDDLMQMVASRRYGPAALLDLRPIAAPYYPADLRPYRFDPTAWITGLEDAK
CCCHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEECCHHHCCCCHHHH
AVARTLLSTSAVALSGSSFRGSDPGPWDDLAFAPLTCLLLAASPQGLGLGIDWVIEAAED
HHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHC
VTLPNPWPTSPQMSTDASWVTAAVWSSNRYFEARVRSVLSMEAKQRDSVKITVTKVLTAW
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
LQTMERDRGLPVLDEEFLEDPNATIYLLTPFDGTVAAQAITLMDQLINRQRVKVAQWDEF
HHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCHHH
SRLGMFLDEITNTPLPRLPQYIAESRGLGVSLCFAAQAGEQLDAIYGPLQGAAIRAVVPA
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHCCCCCCHHHHHHHH
SLLMYGSHEKDLMESASFWSGKTTRSQLSYDHSLDSTSTSRTFGNALEPEELMPPNDSFA
HHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHE
RLLIRGTPGRMVTLIDWTEFVKYLDELRAARLHHSSGGRQRFSGLDAAATA
EEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHCC
>Mature Secondary Structure 
SATPAASGGYRPPVTPFAGWVHDDRGRLVPLETAPHIGAFAPPGTGKTRKWLAQSAVLW
CCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEC
PGPAVVSSSKDDLMQMVASRRYGPAALLDLRPIAAPYYPADLRPYRFDPTAWITGLEDAK
CCCHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEECCHHHCCCCHHHH
AVARTLLSTSAVALSGSSFRGSDPGPWDDLAFAPLTCLLLAASPQGLGLGIDWVIEAAED
HHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHC
VTLPNPWPTSPQMSTDASWVTAAVWSSNRYFEARVRSVLSMEAKQRDSVKITVTKVLTAW
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
LQTMERDRGLPVLDEEFLEDPNATIYLLTPFDGTVAAQAITLMDQLINRQRVKVAQWDEF
HHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCHHH
SRLGMFLDEITNTPLPRLPQYIAESRGLGVSLCFAAQAGEQLDAIYGPLQGAAIRAVVPA
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHCCCCCCHHHHHHHH
SLLMYGSHEKDLMESASFWSGKTTRSQLSYDHSLDSTSTSRTFGNALEPEELMPPNDSFA
HHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHE
RLLIRGTPGRMVTLIDWTEFVKYLDELRAARLHHSSGGRQRFSGLDAAATA
EEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA