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The map label for this gene is eccD2 [H]

Identifier: 119855165

GI number: 119855165

Start: 293364

End: 294881

Strand: Direct

Name: eccD2 [H]

Synonym: Mkms_5780

Alternate gene names: 119855165

Gene position: 293364-294881 (Clockwise)

Preceding gene: 119855164

Following gene: 119855166

Centisome position: 97.11

GC content: 69.83

Gene sequence:

>1518_bases
GTGACCACGGTGAGCCCGTCGACTCCCACGTCAGGATCGTCAGCCCCCGGTGGGCCGTTGGTGCCCTCGTCGTGCAGGGT
GTCGCTGTTGGTCGGCGACGCTCACCAGATTGACCTGGTGTTACCGGCCGCAGTCCCGCTCTCGGCGCTGACAGACTCGA
CTCTCGGGGCGGTCAATCGGCTGCTGCGCAGCAAGGGTGAAGACGAACTCCCTGTAGGGACATATGAATTCGCCCGCGCG
GTGGGGATGACACGGCTCTCGGAGGAGGTGTCGTTGTCGGCGCAGGGTGTCGCCGACGGTGATCTGTTGGCGTTCGTGCC
CGAGAAGACAGCCCGCCGGTACACGCCACTGATCGAGAATGTCTCGACTGCGCTGGCCCGCTGGGCCCATGCCCACTTTC
CTCCGGTGTCGACCCACGACGCGGTGGTGGTCGCCGGGGCGCTCACCGCGGCGGCACTGATCGGGGCGGCCCTGCTGGTG
TGGCGACTGCGTTGGGCGGCCCAGCCGTTCTGGCTGAGCCCCGCGATCTTCGCCGTCACCGCGGGCATCCTGTTGGCGAC
CGCGATGCTGTCGGCGCGCGCTGGGGCCAGCCGCGTCATCGTCGACGGCGCCGCCTGGGCGGCGTTGGTCGGTCTCGTGC
TGGCTGGCGCGAGCGCGCCGTATGGCAACCAGCCCGGGGCCCCGCATGCTTTCCTGGCCGCCGTGGTGGCCACCGTCGGG
GTGCTGCTGTTGGCGCGGATGACGGGCCGCCACTGGACCGCGGCGGCGGCGATCGTCACCGTGACCACGGCCGTCATCGC
CGCCGGCCTGACCCGCATGTTCTTCGACGTTCCCGCTCAACGCATCGCCATTGTCATGTTGATGGCGGTGCTCATCGCTT
CTCGGGCGGCGACCGCGATCGGGCTGTGGATGTCCAAAGTTCCGCGCCAAAGCTTCGAGTCCATCACCGGGCGCGACATG
TTCACCCGCGCGCCAGGTCAGCCCGAGGACACGCTGACACCTGTGGAGTCGGCCGCCCATGACGTGACGCTGCGCGGTGA
GCAGGTCGCCGAGGTGGCCCGCCGGTCCAACCGGGTGCTCACCGGCACCCTGCTCGGGATCGCCGTGGTGCAGCTGGCAG
CCTCCTGGTGGGCGATCGCCCCGGGGTCGGGCTCGCAGTGGCCCTCGATCGTCGTCGTCGTGGTGACGGCGCTGTGCCTG
ATTCTGCGGGCCCGCGGATTGCGGCACCGCCGTCATGCGGTGACCATCGTCAGCGGGTCGGCGCTGTCGCTGATGGCGAT
CCCGCTGCACTACGGCCTCAGCGCTCCGGCCTCGGCGACCGTCTCGGTGGCGGTGTCGGCGGCCGCGGTGTTGGCCGTGG
CCGTGGCCGGGCTGCTGGCCGGGGCGGTCATTCCCTCCCGCAGCTTCTCTGAACCCATCCGCCAAGTCGTGGAATGGCTG
GAGTACCTCGGCTATGCCCTGATCGTGCCGTTCGCCGCGTGGGCGATCGGGCTGCTGCAATACATCAGGTTGCACTGA

Upstream 100 bases:

>100_bases
AGAACGAAATCGACAAGGTGACGCGTCGACGGTTCATCGAGATCGCCGCGGCGATCGCCGAGCACTTTCCCACGACCAGC
GACAGTCTGCGGGGGCGCCG

Downstream 100 bases:

>100_bases
TGCGGGGCAAAAGTGTGGCGGCCGGCCTGGCCGCATTCGGACTGCTCAGCGCCAACGTGTTGGCGCCCCCGGCGGCGCTG
GCGGTGGCCCCGCCGGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component D2; Type VII secretion system protein eccD2; T7SS protein eccD2 [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MTTVSPSTPTSGSSAPGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSKGEDELPVGTYEFARA
VGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALARWAHAHFPPVSTHDAVVVAGALTAAALIGAALLV
WRLRWAAQPFWLSPAIFAVTAGILLATAMLSARAGASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVG
VLLLARMTGRHWTAAAAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAIGLWMSKVPRQSFESITGRDM
FTRAPGQPEDTLTPVESAAHDVTLRGEQVAEVARRSNRVLTGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCL
ILRARGLRHRRHAVTIVSGSALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWL
EYLGYALIVPFAAWAIGLLQYIRLH

Sequences:

>Translated_505_residues
MTTVSPSTPTSGSSAPGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSKGEDELPVGTYEFARA
VGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALARWAHAHFPPVSTHDAVVVAGALTAAALIGAALLV
WRLRWAAQPFWLSPAIFAVTAGILLATAMLSARAGASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVG
VLLLARMTGRHWTAAAAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAIGLWMSKVPRQSFESITGRDM
FTRAPGQPEDTLTPVESAAHDVTLRGEQVAEVARRSNRVLTGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCL
ILRARGLRHRRHAVTIVSGSALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWL
EYLGYALIVPFAAWAIGLLQYIRLH
>Mature_504_residues
TTVSPSTPTSGSSAPGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSKGEDELPVGTYEFARAV
GMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALARWAHAHFPPVSTHDAVVVAGALTAAALIGAALLVW
RLRWAAQPFWLSPAIFAVTAGILLATAMLSARAGASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVGV
LLLARMTGRHWTAAAAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAIGLWMSKVPRQSFESITGRDMF
TRAPGQPEDTLTPVESAAHDVTLRGEQVAEVARRSNRVLTGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCLI
LRARGLRHRRHAVTIVSGSALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWLE
YLGYALIVPFAAWAIGLLQYIRLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccD/snm4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006707 [H]

Pfam domain/function: PF04600 DUF571 [H]

EC number: NA

Molecular weight: Translated: 52424; Mature: 52292

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVSPSTPTSGSSAPGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
LLRSKGEDELPVGTYEFARAVGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIEN
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH
VSTALARWAHAHFPPVSTHDAVVVAGALTAAALIGAALLVWRLRWAAQPFWLSPAIFAVT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AGILLATAMLSARAGASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVG
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VLLLARMTGRHWTAAAAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLWMSKVPRQSFESITGRDMFTRAPGQPEDTLTPVESAAHDVTLRGEQVAEVARRSNRVL
HHHHHHCCHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHCCCEEECHHHHHHHHHHCCCEE
TGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCLILRARGLRHRRHAVTIVSGS
HHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
ALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWL
CHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EYLGYALIVPFAAWAIGLLQYIRLH
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVSPSTPTSGSSAPGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
LLRSKGEDELPVGTYEFARAVGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIEN
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH
VSTALARWAHAHFPPVSTHDAVVVAGALTAAALIGAALLVWRLRWAAQPFWLSPAIFAVT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AGILLATAMLSARAGASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVG
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VLLLARMTGRHWTAAAAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLWMSKVPRQSFESITGRDMFTRAPGQPEDTLTPVESAAHDVTLRGEQVAEVARRSNRVL
HHHHHHCCHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHCCCEEECHHHHHHHHHHCCCEE
TGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCLILRARGLRHRRHAVTIVSGS
HHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
ALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWL
CHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EYLGYALIVPFAAWAIGLLQYIRLH
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]