Click here to switch to the map view.

The map label for this gene is 119855047

Identifier: 119855047

GI number: 119855047

Start: 166528

End: 167256

Strand: Reverse

Name: 119855047

Synonym: Mkms_5657

Alternate gene names: NA

Gene position: 167256-166528 (Counterclockwise)

Preceding gene: 119855048

Following gene: 119855046

Centisome position: 55.37

GC content: 66.67

Gene sequence:

>729_bases
GTGTCGCTGGTGCGTGTGCGGGTTGTCGCCGTTGTGGGCGTGACCGCGATGCTGGTGGCGTCCAGCTGTTCGTGCCAGAT
CGGCACCTCGATGCCCGAAGGTATTCCGCCACCCTCGGGCGCCCCGGTGCCCTACATTGACTATCCTGCCCGCGGCCGAC
CCGCCGACCAGTTGCGCGTCTGGGCTGCCCAGCGGGCGCCGGCGCTGAATATGCCGGCTACCGCGCTGGAGGCATATGCC
TATGCGGCCAGAGTCGCCCACGTCGAGAACCCCGACTGCCAGCTGGCTTGGACGACGCTGGCGGGGATTGGCATGGTCGA
GAGCCGCAACGGCACCTTTCGCGGCGCTACCATCGCCCCGAACGGGGATGTCACTCCGCCGATTCGTGGTGTACGCCTTG
ATGGCTCGAACGGCAATATGCGCATCATCGACAACGGCGGCGGCTCGCCCGACGGTGAGCCCGGATTCGCCCAGGCGATG
GGTCCGATGCAGTTCATCCCGGAGACTTGGCGGCTGTATGGGGTCGATGCCAACAACGACGGCGTCGTCAGTCCCGACAA
TGTCGACGATGCTGCGCTGTCGGCCGCCGGCTATCTCTGCAATCGCGGCGGCGACCTGGCGACGCCACAGGGGTGGATGA
AAGCGCTGCGGGCTTACAACCAGTCTGATCCGTACGCCCGCAGCGTGCGAGACTGGGCCACAGCCTATGCTTCCGGCCAC
TCTCTGTAG

Upstream 100 bases:

>100_bases
TGCCACCGCTCGGACGTCTGCGCCCACAACACGCAAGGTGAACCCCCGGCTTCAGGCCCGTGGCACAATGGCTTCGACCA
GAATGGCTTGAGGGAGTCCA

Downstream 100 bases:

>100_bases
CCACTTCGAGGTCGCCGAATCTATGCGGTCGCGCGCATTATCGACACATAGATGTGGCGCGGCGGCGGGTCGCGCATAGG
ATCGAACTGCCATCTGATGA

Product: putative lipoprotein LpqU

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LpqU Protein; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; Membrane-Bound Lytic Murein Transglycosylase; NLP/P60 Protein; Cell Wall-Associated Hydrolase Invasion-Associated Protein

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSLVRVRVVAVVGVTAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRVWAAQRAPALNMPATALEAYA
YAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLDGSNGNMRIIDNGGGSPDGEPGFAQAM
GPMQFIPETWRLYGVDANNDGVVSPDNVDDAALSAAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGH
SL

Sequences:

>Translated_242_residues
MSLVRVRVVAVVGVTAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRVWAAQRAPALNMPATALEAYA
YAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLDGSNGNMRIIDNGGGSPDGEPGFAQAM
GPMQFIPETWRLYGVDANNDGVVSPDNVDDAALSAAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGH
SL
>Mature_241_residues
SLVRVRVVAVVGVTAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRVWAAQRAPALNMPATALEAYAY
AARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLDGSNGNMRIIDNGGGSPDGEPGFAQAMG
PMQFIPETWRLYGVDANNDGVVSPDNVDDAALSAAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGHS
L

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25420; Mature: 25289

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVRVRVVAVVGVTAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRV
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHH
WAAQRAPALNMPATALEAYAYAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAP
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCEEECCCCCEECCEECC
NGDVTPPIRGVRLDGSNGNMRIIDNGGGSPDGEPGFAQAMGPMQFIPETWRLYGVDANND
CCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHCCCHHHCCCCEEEEEECCCCC
GVVSPDNVDDAALSAAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGH
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
SL
CC
>Mature Secondary Structure 
SLVRVRVVAVVGVTAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRV
CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHH
WAAQRAPALNMPATALEAYAYAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAP
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCEEECCCCCEECCEECC
NGDVTPPIRGVRLDGSNGNMRIIDNGGGSPDGEPGFAQAMGPMQFIPETWRLYGVDANND
CCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHCCCHHHCCCCEEEEEECCCCC
GVVSPDNVDDAALSAAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGH
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
SL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA