| Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
|---|---|
| Accession | NC_008703 |
| Length | 302,089 |
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The map label for this gene is yceL [C]
Identifier: 119854962
GI number: 119854962
Start: 76225
End: 77430
Strand: Reverse
Name: yceL [C]
Synonym: Mkms_5568
Alternate gene names: 119854962
Gene position: 77430-76225 (Counterclockwise)
Preceding gene: 119854963
Following gene: 119854958
Centisome position: 25.63
GC content: 68.41
Gene sequence:
>1206_bases ATGAGTACGCCCAACTCTGCCGATACAGGCCTCGGGGGGAGCCGAACTCAGTTGTTGCCTTTGTACGCGGCGGGATTCGT CACCGCATTCGGCGCTCACAGCATTGCCGCCACCTTGGGCGGCTATATCGACGGGCCATACACATCGCTGCTCACCCTGG GCCTGCTGCTGGCCATCTACGACGGAGCCGAAGTCATCCTCAAACCGGTATTCGGATCGTTGGCCGATCGCATTGGCGCC CGCCCAGTTCTGCTCGGCGGACTGCTCGCTTTCGCCGCGGCATCCGCTGCCTTCGTCATCGCTGGAGATCCTGCCTGGTT GGGCGTGACCCGATTCGCTCAGGGCGCCGCCGCAGCAGCATTCTCACCTGCCGCCGGGGTATTGGTGTCGCGGCTAACCG CGCCGGGGCAGCAAGGCCGCGGCTTCGGTCGCTACGGTGCCTGGAAAGGACTTGGCTACACCCTGGGACCGGTATTGGGA GGGGTGCTCATCACCTGGGGCGGCTACACCCTGCTCTTCGCCACGCTCGCCACACTAGGAACGGCGGTCGCAGCGTGGGC GCTGCTGATGGTGCCGGGGGTGGCACCGTTGCCGCGGGTCCGCCAGACGGTACTCGACCTGGGCCGCCGACTCGCCAGCC CGGGCTTTCTGCGCCCGACCCTCGCACTAGCCGCGGCCACCGCCGCATTATCGGTCGGTGTTGGCTTCCTCCCCGTCATC GGCGCCAGCCGCGGCCTCAGCCCACTTCTCACCGGAGCGGTCGTCTCGGTGTTGGCAGCGGCGACCGCCGTAGTTCAGCC CGGGGTTGGGCGCGCTCGCGATGACGGGCGCATCGGGGACCGCACCGGGTTGTCAACCGGCCTACTGCTCGCTGCCGCCG GGTGCGCGGCGGTGGTGATACCAGGAATCATGGGCCTGGCCAGCGCTGCCGTACTGATCGGCATTGGCGTAGGCGTCGTC ACCCCGATCGGGTTCGCCTCTCTGGCCGCGTCCACTCCCGCTGAACGGCTCGGCCAAACCATGGGCTCTGCCGAAGTGGG CCGCGAACTCGGAGATGCCGGTGGGCCACTACTCGTCGGCGCCCTCGCCGCCGCGGCCACCTTGACCCCTGCGCTACTGG TACTCGCTACTGTCCTAGCCGCCACCGCCGCGCTCAGCACCGCGCCCAGCGCCGGTCGTCACGCCCAAACCAGCAATGAC ACCTAG
Upstream 100 bases:
>100_bases CATTGCATCGAACGCCTCGCCGACTACACCGAGCGGGTTTTCACCGCGTTGCACCAGCTATGACACTCGCCACCGCCGGC ACAAACCCACTGTCACTGGC
Downstream 100 bases:
>100_bases TCATCTCCACCGATCCGCATCACCCGCCGCCGAACTTGCCACCGGCTCTAGATCGCCGCTACACACCTCCACCTGAGGCA AGAACTGATCGACCTCGTTT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Tetracycline Resistance Protein; Drug Resistance Efflux Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSTPNSADTGLGGSRTQLLPLYAAGFVTAFGAHSIAATLGGYIDGPYTSLLTLGLLLAIYDGAEVILKPVFGSLADRIGA RPVLLGGLLAFAAASAAFVIAGDPAWLGVTRFAQGAAAAAFSPAAGVLVSRLTAPGQQGRGFGRYGAWKGLGYTLGPVLG GVLITWGGYTLLFATLATLGTAVAAWALLMVPGVAPLPRVRQTVLDLGRRLASPGFLRPTLALAAATAALSVGVGFLPVI GASRGLSPLLTGAVVSVLAAATAVVQPGVGRARDDGRIGDRTGLSTGLLLAAAGCAAVVIPGIMGLASAAVLIGIGVGVV TPIGFASLAASTPAERLGQTMGSAEVGRELGDAGGPLLVGALAAAATLTPALLVLATVLAATAALSTAPSAGRHAQTSND T
Sequences:
>Translated_401_residues MSTPNSADTGLGGSRTQLLPLYAAGFVTAFGAHSIAATLGGYIDGPYTSLLTLGLLLAIYDGAEVILKPVFGSLADRIGA RPVLLGGLLAFAAASAAFVIAGDPAWLGVTRFAQGAAAAAFSPAAGVLVSRLTAPGQQGRGFGRYGAWKGLGYTLGPVLG GVLITWGGYTLLFATLATLGTAVAAWALLMVPGVAPLPRVRQTVLDLGRRLASPGFLRPTLALAAATAALSVGVGFLPVI GASRGLSPLLTGAVVSVLAAATAVVQPGVGRARDDGRIGDRTGLSTGLLLAAAGCAAVVIPGIMGLASAAVLIGIGVGVV TPIGFASLAASTPAERLGQTMGSAEVGRELGDAGGPLLVGALAAAATLTPALLVLATVLAATAALSTAPSAGRHAQTSND T >Mature_400_residues STPNSADTGLGGSRTQLLPLYAAGFVTAFGAHSIAATLGGYIDGPYTSLLTLGLLLAIYDGAEVILKPVFGSLADRIGAR PVLLGGLLAFAAASAAFVIAGDPAWLGVTRFAQGAAAAAFSPAAGVLVSRLTAPGQQGRGFGRYGAWKGLGYTLGPVLGG VLITWGGYTLLFATLATLGTAVAAWALLMVPGVAPLPRVRQTVLDLGRRLASPGFLRPTLALAAATAALSVGVGFLPVIG ASRGLSPLLTGAVVSVLAAATAVVQPGVGRARDDGRIGDRTGLSTGLLLAAAGCAAVVIPGIMGLASAAVLIGIGVGVVT PIGFASLAASTPAERLGQTMGSAEVGRELGDAGGPLLVGALAAAATLTPALLVLATVLAATAALSTAPSAGRHAQTSNDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39199; Mature: 39068
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPNSADTGLGGSRTQLLPLYAAGFVTAFGAHSIAATLGGYIDGPYTSLLTLGLLLAIY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DGAEVILKPVFGSLADRIGARPVLLGGLLAFAAASAAFVIAGDPAWLGVTRFAQGAAAAA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHH FSPAAGVLVSRLTAPGQQGRGFGRYGAWKGLGYTLGPVLGGVLITWGGYTLLFATLATLG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH TAVAAWALLMVPGVAPLPRVRQTVLDLGRRLASPGFLRPTLALAAATAALSVGVGFLPVI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH GASRGLSPLLTGAVVSVLAAATAVVQPGVGRARDDGRIGDRTGLSTGLLLAAAGCAAVVI CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PGIMGLASAAVLIGIGVGVVTPIGFASLAASTPAERLGQTMGSAEVGRELGDAGGPLLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCCCHHHHH ALAAAATLTPALLVLATVLAATAALSTAPSAGRHAQTSNDT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure STPNSADTGLGGSRTQLLPLYAAGFVTAFGAHSIAATLGGYIDGPYTSLLTLGLLLAIY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DGAEVILKPVFGSLADRIGARPVLLGGLLAFAAASAAFVIAGDPAWLGVTRFAQGAAAAA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHH FSPAAGVLVSRLTAPGQQGRGFGRYGAWKGLGYTLGPVLGGVLITWGGYTLLFATLATLG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH TAVAAWALLMVPGVAPLPRVRQTVLDLGRRLASPGFLRPTLALAAATAALSVGVGFLPVI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH GASRGLSPLLTGAVVSVLAAATAVVQPGVGRARDDGRIGDRTGLSTGLLLAAAGCAAVVI CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PGIMGLASAAVLIGIGVGVVTPIGFASLAASTPAERLGQTMGSAEVGRELGDAGGPLLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCCCHHHHH ALAAAATLTPALLVLATVLAATAALSTAPSAGRHAQTSNDT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA