Click here to switch to the map view.

The map label for this gene is 119776731

Identifier: 119776731

GI number: 119776731

Start: 4232852

End: 4233490

Strand: Direct

Name: 119776731

Synonym: Sama_3599

Alternate gene names: NA

Gene position: 4232852-4233490 (Clockwise)

Preceding gene: 119776729

Following gene: 119776734

Centisome position: 98.3

GC content: 51.8

Gene sequence:

>639_bases
ATGACAAGCCGATTACTGCGCTGGGCAGAGTTTGTCTGCATGTTTGTGCTTCTGCCATTCATCGCTTTTCACTATCGACA
CCTATTGAGCAACTGGTTGCTACCGGTGCTGTGTCTGCTGGCGCTCTTTTGCCTGTATTTGATCCTGAACGACAGTCGCT
TCAAGCGTTTTCGCCTGACCAACTATGCCAATTTGAAACACCTGCTGTGGTACTCTCCGACGCTGTTTGCTCTTGGCGTA
TTGATATCCGTCCTGGCTCTGTCTGCTTATGCCCCGGAGCAGATTTTTGTACTGCCCACCCGCGATTTTTACAGCTGGTG
TTTGCTGCTGGCCCTATATCCGCTTTTTTCAGTGATCCCACAAGAGCTGATATTTCGCACTTATTTATTTCATCGATTCA
AAGGGATTATGCCAAGCAAGACGCTGAGGACCTGGGTCAGTGCGGCGGTATTCGCCCTGGCCCATATTATTTATGCGAAC
TGGATTGCCGTAGTACTGGCGTTTATTGGAGGGCTGATGTTTGCCTATACCTATGCCAGCTCCCGCTCCACCGCAGCCTG
CGTGCTGGAACACAGCCTCTGGGGGCTGTGGCTTTTTACCCTGGGCGCTGGCCAGTATCTTAGCCTCGCCCCTCAGTGA

Upstream 100 bases:

>100_bases
CGTAGGTTGAATTTATTGCCAAAAAATTCCGCAACCCAAGATGGCGAAACAGGACATCACGTCCTGTGCTAGTGTTGTTA
GGTACCCATGGGGGAAAGAA

Downstream 100 bases:

>100_bases
GCTGCGCTGAACTCGGTGGCGTCTTGATTCAGATGCTTCACCAAATCATGCAATGCCATGGGGCGTCCCAGATAATAACC
CTGAGCCTGCTGACATCCCA

Product: abortive infection protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTSRLLRWAEFVCMFVLLPFIAFHYRHLLSNWLLPVLCLLALFCLYLILNDSRFKRFRLTNYANLKHLLWYSPTLFALGV
LISVLALSAYAPEQIFVLPTRDFYSWCLLLALYPLFSVIPQELIFRTYLFHRFKGIMPSKTLRTWVSAAVFALAHIIYAN
WIAVVLAFIGGLMFAYTYASSRSTAACVLEHSLWGLWLFTLGAGQYLSLAPQ

Sequences:

>Translated_212_residues
MTSRLLRWAEFVCMFVLLPFIAFHYRHLLSNWLLPVLCLLALFCLYLILNDSRFKRFRLTNYANLKHLLWYSPTLFALGV
LISVLALSAYAPEQIFVLPTRDFYSWCLLLALYPLFSVIPQELIFRTYLFHRFKGIMPSKTLRTWVSAAVFALAHIIYAN
WIAVVLAFIGGLMFAYTYASSRSTAACVLEHSLWGLWLFTLGAGQYLSLAPQ
>Mature_211_residues
TSRLLRWAEFVCMFVLLPFIAFHYRHLLSNWLLPVLCLLALFCLYLILNDSRFKRFRLTNYANLKHLLWYSPTLFALGVL
ISVLALSAYAPEQIFVLPTRDFYSWCLLLALYPLFSVIPQELIFRTYLFHRFKGIMPSKTLRTWVSAAVFALAHIIYANW
IAVVLAFIGGLMFAYTYASSRSTAACVLEHSLWGLWLFTLGAGQYLSLAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24494; Mature: 24362

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRLLRWAEFVCMFVLLPFIAFHYRHLLSNWLLPVLCLLALFCLYLILNDSRFKRFRLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
NYANLKHLLWYSPTLFALGVLISVLALSAYAPEQIFVLPTRDFYSWCLLLALYPLFSVIP
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
QELIFRTYLFHRFKGIMPSKTLRTWVSAAVFALAHIIYANWIAVVLAFIGGLMFAYTYAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRSTAACVLEHSLWGLWLFTLGAGQYLSLAPQ
CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCC
>Mature Secondary Structure 
TSRLLRWAEFVCMFVLLPFIAFHYRHLLSNWLLPVLCLLALFCLYLILNDSRFKRFRLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
NYANLKHLLWYSPTLFALGVLISVLALSAYAPEQIFVLPTRDFYSWCLLLALYPLFSVIP
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
QELIFRTYLFHRFKGIMPSKTLRTWVSAAVFALAHIIYANWIAVVLAFIGGLMFAYTYAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRSTAACVLEHSLWGLWLFTLGAGQYLSLAPQ
CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA