Click here to switch to the map view.

The map label for this gene is qorB [H]

Identifier: 119776682

GI number: 119776682

Start: 4182295

End: 4183149

Strand: Direct

Name: qorB [H]

Synonym: Sama_3550

Alternate gene names: 119776682

Gene position: 4182295-4183149 (Clockwise)

Preceding gene: 119776679

Following gene: 119776683

Centisome position: 97.12

GC content: 57.66

Gene sequence:

>855_bases
ATGATCCTGATACTCGGCGCCAGTGGTGAACTGGCCACCCTTACTGCCAATGCCCTGAACACTCTTGGCAATACCGAAAT
TGTACGACTGGGCAGCCGCTCACCGGACAAACTGGATGCGACACTTGGCCATGTTGTGTTTGCCGACTATGACCAGCCAG
ACTCTCTGGATGCAGCCATGGCGGGAGCAGACAAGGTACTGTTTATTTCCGGTAATACCCCCAATGATATCCGTCTGGGT
CAACATCTGCGGGTTATCGCCGCCGCCAAAAAGGCCGGGGTTGCCCAGCTGGTATACACCAGTTTTCAATCACCCTCGCT
GGACAGCGCCTTCAGTTTCGGCGCCAGTCATGCCGCCACCGAAGCGGCCATCAGCGCGGCAGCCATTCCCGCCACTGTGG
TACGCAATGCCTTTTATGCCGAGCTGCAACTGATGGGCCTGAGCCACACACTGGAGACAGGCGTACTGACCCATGCCGCA
GCAGAGGGCCGCTTTGCCCCCGTAAGCAAACAGGATTTGGCCGAGGCGCTGGCGCGAATATTGATGACCGATGGCCACAC
AGGCAAGATTTACGAACTGACCGGGCCTGAACTCCTGTCCTATGCGGACATCGCCGCCCTGATTGGACAGCTCAGTGGTA
ACGCCATCAGTACCCACCTCATTTCGGCCCAGGCCCAAGTCGATACGCTGCTGAATATGGGATTACCGGCATTTTTAGCC
ACGGCACTCGGCGGGGCCAGTCGGGCCATTGCCGCAGGGGAATATGATAAGCGCAGCGATGATTTAGCCCTGCTGCTTGG
CCGCGCACCCACAAGTTTGGCCACTGTCATCAAAGGAGCGTTGAAGCCAAACTGA

Upstream 100 bases:

>100_bases
AAGTTTGAATTACCAAAGATATAAGTAAATCACTCATTATCCGATTTCGCCACGGGAATAAACTGAGCACCTCATTCATA
CCAACCCTGAGGTACTCAAG

Downstream 100 bases:

>100_bases
GTGTGCAAGTACACTGGCAAGGCCATTCACAGTTTCAGGGAAGTCCATGAAAATTGAATCCTTTGCCAGTATTTATCAGC
GCGCCGCCGAGCGCAAAGGC

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MILILGASGELATLTANALNTLGNTEIVRLGSRSPDKLDATLGHVVFADYDQPDSLDAAMAGADKVLFISGNTPNDIRLG
QHLRVIAAAKKAGVAQLVYTSFQSPSLDSAFSFGASHAATEAAISAAAIPATVVRNAFYAELQLMGLSHTLETGVLTHAA
AEGRFAPVSKQDLAEALARILMTDGHTGKIYELTGPELLSYADIAALIGQLSGNAISTHLISAQAQVDTLLNMGLPAFLA
TALGGASRAIAAGEYDKRSDDLALLLGRAPTSLATVIKGALKPN

Sequences:

>Translated_284_residues
MILILGASGELATLTANALNTLGNTEIVRLGSRSPDKLDATLGHVVFADYDQPDSLDAAMAGADKVLFISGNTPNDIRLG
QHLRVIAAAKKAGVAQLVYTSFQSPSLDSAFSFGASHAATEAAISAAAIPATVVRNAFYAELQLMGLSHTLETGVLTHAA
AEGRFAPVSKQDLAEALARILMTDGHTGKIYELTGPELLSYADIAALIGQLSGNAISTHLISAQAQVDTLLNMGLPAFLA
TALGGASRAIAAGEYDKRSDDLALLLGRAPTSLATVIKGALKPN
>Mature_284_residues
MILILGASGELATLTANALNTLGNTEIVRLGSRSPDKLDATLGHVVFADYDQPDSLDAAMAGADKVLFISGNTPNDIRLG
QHLRVIAAAKKAGVAQLVYTSFQSPSLDSAFSFGASHAATEAAISAAAIPATVVRNAFYAELQLMGLSHTLETGVLTHAA
AEGRFAPVSKQDLAEALARILMTDGHTGKIYELTGPELLSYADIAALIGQLSGNAISTHLISAQAQVDTLLNMGLPAFLA
TALGGASRAIAAGEYDKRSDDLALLLGRAPTSLATVIKGALKPN

Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NmrA-type oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1790656, Length=281, Percent_Identity=32.7402135231317, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: =1.6.5.2 [H]

Molecular weight: Translated: 29261; Mature: 29261

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILILGASGELATLTANALNTLGNTEIVRLGSRSPDKLDATLGHVVFADYDQPDSLDAAM
CEEEEECCCCEEEEEHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEEECCCCCCCHHHHH
AGADKVLFISGNTPNDIRLGQHLRVIAAAKKAGVAQLVYTSFQSPSLDSAFSFGASHAAT
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCCCHHHHH
EAAISAAAIPATVVRNAFYAELQLMGLSHTLETGVLTHAAAEGRFAPVSKQDLAEALARI
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LMTDGHTGKIYELTGPELLSYADIAALIGQLSGNAISTHLISAQAQVDTLLNMGLPAFLA
HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TALGGASRAIAAGEYDKRSDDLALLLGRAPTSLATVIKGALKPN
HHHCCCHHEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MILILGASGELATLTANALNTLGNTEIVRLGSRSPDKLDATLGHVVFADYDQPDSLDAAM
CEEEEECCCCEEEEEHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEEECCCCCCCHHHHH
AGADKVLFISGNTPNDIRLGQHLRVIAAAKKAGVAQLVYTSFQSPSLDSAFSFGASHAAT
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCCCHHHHH
EAAISAAAIPATVVRNAFYAELQLMGLSHTLETGVLTHAAAEGRFAPVSKQDLAEALARI
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LMTDGHTGKIYELTGPELLSYADIAALIGQLSGNAISTHLISAQAQVDTLLNMGLPAFLA
HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TALGGASRAIAAGEYDKRSDDLALLLGRAPTSLATVIKGALKPN
HHHCCCHHEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]