| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheB1 [H]
Identifier: 119776631
GI number: 119776631
Start: 4130818
End: 4131837
Strand: Direct
Name: cheB1 [H]
Synonym: Sama_3499
Alternate gene names: 119776631
Gene position: 4130818-4131837 (Clockwise)
Preceding gene: 119776630
Following gene: 119776633
Centisome position: 95.93
GC content: 55.78
Gene sequence:
>1020_bases ATGATAAGAGTACTCATCGTCGATGACTCTGCTCTGGTTAGGAAATTGCTGAGCCATATGCTGGCGCAGGCAGAGGACAT CGATGTGGTGGGCTGTGCAGAAGATCCCTATCAGGCCAGGGAGATGATTAAGGAGCTCAACCCGGATGTGATAACTCTGG ACATTGAAATGCCCCGCATGGATGGCATCGCATTTTTACGCAACCTGATGAAGCTGCGCCCCATGCCCGTCATCATGATT TCCACACTCACGGAAAAGGGGGCCGCCGTGACTTTGGAGGCCCTGTCTCTTGGGGCCGTGGACTTTATCAGTAAGCCCAA ACATGACCTGACCAACAAGCTGCTCGACTATCAGGATGAACTGCTGGAAAAAGTCCGTCAGGCGGCGGTCAGCAGGGTAA GGGCCCTTTCTGCACCACCACCTGAGTCTGAGAGCTCCGGCAAGCTGAAAAACCGGGTAATTGCCATAGGTGCTTCCACC GGCGGCACAGAAGCCATTCAACGACTCATTTCCATGCTGCCAGCCAACTTCCCGCCTGTGGTTATCGCACAGCACATACC CGCTGCCTTCAGTGCTTCCTTTGCCAAACGTCTGGACCTGAACTCGCAGATGCAAGTGGTTGAGGCCATCGGCAATGAGC AATTAAAAGTCGGCAACGTCTATATCGCCCCGGGTCACGCCCATCTGGTCATTCGCCGGGTAGGCGCCCACTTTCGCACC GCCATTTTGGACACAGACCCGGTGAATCGGCACAAACCCTCGGTGGATGTGCTGTTTCACAGTGTGGCAGAAGTCGCAGG CAGGGCTGCAGTGGGCGTGATTCTCACCGGTATGGGGCGTGATGGCGCCCAGGGACTGCTGCATATGCGGGAACAGGGAG CCTACACAATAGCTCAGGATGAAGACAGCTCTGTTGTGTGGGGCATGCCGGGCAGCTCCGTTGAGCTGGGTGCCGCCTGT GAGCAGCTCCATCTGGACAAGATTGCACCCAAGCTGCTCAGTTTACTCAAATCAGATTAG
Upstream 100 bases:
>100_bases CGGAAACCCTGCACCTGATTTCCGATGACTTTGATCTCATTGGCCAGACCATATACAAACCCAGAATAGGCAGCATTTCG GGACTTAACGGGGAAAGAAA
Downstream 100 bases:
>100_bases GGCTCTTTTGGCCAGCTGCCATCTTTGTTGGGCCTGAGCCAGGCCTGGGAAAACCAGTAAAATCCCTTTTGTGTTTTGGA TGGTGCGGTGCAGTTATAGC
Product: protein-glutamate methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIRVLIVDDSALVRKLLSHMLAQAEDIDVVGCAEDPYQAREMIKELNPDVITLDIEMPRMDGIAFLRNLMKLRPMPVIMI STLTEKGAAVTLEALSLGAVDFISKPKHDLTNKLLDYQDELLEKVRQAAVSRVRALSAPPPESESSGKLKNRVIAIGAST GGTEAIQRLISMLPANFPPVVIAQHIPAAFSASFAKRLDLNSQMQVVEAIGNEQLKVGNVYIAPGHAHLVIRRVGAHFRT AILDTDPVNRHKPSVDVLFHSVAEVAGRAAVGVILTGMGRDGAQGLLHMREQGAYTIAQDEDSSVVWGMPGSSVELGAAC EQLHLDKIAPKLLSLLKSD
Sequences:
>Translated_339_residues MIRVLIVDDSALVRKLLSHMLAQAEDIDVVGCAEDPYQAREMIKELNPDVITLDIEMPRMDGIAFLRNLMKLRPMPVIMI STLTEKGAAVTLEALSLGAVDFISKPKHDLTNKLLDYQDELLEKVRQAAVSRVRALSAPPPESESSGKLKNRVIAIGAST GGTEAIQRLISMLPANFPPVVIAQHIPAAFSASFAKRLDLNSQMQVVEAIGNEQLKVGNVYIAPGHAHLVIRRVGAHFRT AILDTDPVNRHKPSVDVLFHSVAEVAGRAAVGVILTGMGRDGAQGLLHMREQGAYTIAQDEDSSVVWGMPGSSVELGAAC EQLHLDKIAPKLLSLLKSD >Mature_339_residues MIRVLIVDDSALVRKLLSHMLAQAEDIDVVGCAEDPYQAREMIKELNPDVITLDIEMPRMDGIAFLRNLMKLRPMPVIMI STLTEKGAAVTLEALSLGAVDFISKPKHDLTNKLLDYQDELLEKVRQAAVSRVRALSAPPPESESSGKLKNRVIAIGAST GGTEAIQRLISMLPANFPPVVIAQHIPAAFSASFAKRLDLNSQMQVVEAIGNEQLKVGNVYIAPGHAHLVIRRVGAHFRT AILDTDPVNRHKPSVDVLFHSVAEVAGRAAVGVILTGMGRDGAQGLLHMREQGAYTIAQDEDSSVVWGMPGSSVELGAAC EQLHLDKIAPKLLSLLKSD
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=338, Percent_Identity=50.887573964497, Blast_Score=337, Evalue=7e-94, Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=38.6792452830189, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 36660; Mature: 36660
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVLIVDDSALVRKLLSHMLAQAEDIDVVGCAEDPYQAREMIKELNPDVITLDIEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEEECCCC DGIAFLRNLMKLRPMPVIMISTLTEKGAAVTLEALSLGAVDFISKPKHDLTNKLLDYQDE CHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHH LLEKVRQAAVSRVRALSAPPPESESSGKLKNRVIAIGASTGGTEAIQRLISMLPANFPPV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC VIAQHIPAAFSASFAKRLDLNSQMQVVEAIGNEQLKVGNVYIAPGHAHLVIRRVGAHFRT HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECEEEEECCHHHHHHHHHHHHHHH AILDTDPVNRHKPSVDVLFHSVAEVAGRAAVGVILTGMGRDGAQGLLHMREQGAYTIAQD HEECCCCCCCCCCHHHHHHHHHHHHHCHHEEEHEEECCCCCHHHHHHHHHHCCCEEEECC EDSSVVWGMPGSSVELGAACEQLHLDKIAPKLLSLLKSD CCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRVLIVDDSALVRKLLSHMLAQAEDIDVVGCAEDPYQAREMIKELNPDVITLDIEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEEECCCC DGIAFLRNLMKLRPMPVIMISTLTEKGAAVTLEALSLGAVDFISKPKHDLTNKLLDYQDE CHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHH LLEKVRQAAVSRVRALSAPPPESESSGKLKNRVIAIGASTGGTEAIQRLISMLPANFPPV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC VIAQHIPAAFSASFAKRLDLNSQMQVVEAIGNEQLKVGNVYIAPGHAHLVIRRVGAHFRT HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECEEEEECCHHHHHHHHHHHHHHH AILDTDPVNRHKPSVDVLFHSVAEVAGRAAVGVILTGMGRDGAQGLLHMREQGAYTIAQD HEECCCCCCCCCCHHHHHHHHHHHHHCHHEEEHEEECCCCCHHHHHHHHHHCCCEEEECC EDSSVVWGMPGSSVELGAACEQLHLDKIAPKLLSLLKSD CCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]