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The map label for this gene is hmp [H]

Identifier: 119776610

GI number: 119776610

Start: 4109170

End: 4109595

Strand: Direct

Name: hmp [H]

Synonym: Sama_3478

Alternate gene names: 119776610

Gene position: 4109170-4109595 (Clockwise)

Preceding gene: 119776608

Following gene: 119776613

Centisome position: 95.43

GC content: 50.94

Gene sequence:

>426_bases
ATGTCACTGACCAACGACCAAATATCACTCATCAACCAGTCTTTCGGCCTGGTTCGCCCCATTGCCGATGACGCAGCGGC
ACTTTTCTATCGCAACCTGTTCGAAATAGACCCATCACTGCGGTCATTATTTAAATCCGATCTCAAGATTCAGGGACGCA
AGCTGATGGCGATGTTGGATGCCGCAGTAAAGGGACTGAATAACCCGGATAAGTTAGTCCCTGTCTTGCAGGACCTGGCC
CGGCGGCATGTGCAATACGGAGTGAAAACCCATCATTTTTCTCCCGTGGGCAACGCACTGCTGTATACCCTGGCCGAAGG
CTTGGGTGACAAGTTTACCAAAGAAGTGAAAGACGCCTGGATAGCGGTATTACATTTGGTCGCAGATGTGATGAAGGCGG
AGATGAAAAAGCAGGGCTGTGCCTAG

Upstream 100 bases:

>100_bases
ATGCCCCTGACTCCTTCAGGTAAGTGTATGGAATTCAAGTTAAGTAGTCTTAACTAACTTTGTCTATGCTTAGGGAAACA
ATTTCAGGGATGGAATCTCT

Downstream 100 bases:

>100_bases
TCAAGTGAAACGGGAGAAGTGGAGCAATTGGACTGGAGCGGGTGAAGGGAATCGAACCCTCGTATGCAGCTTGGGAAGCT
GCCGTTCTACCATTGAACTA

Product: putative hemoglobin

Products: NA

Alternate protein names: Flavohemoglobin; Hemoglobin-like protein; Nitric oxide dioxygenase; NO oxygenase; NOD [H]

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSLTNDQISLINQSFGLVRPIADDAAALFYRNLFEIDPSLRSLFKSDLKIQGRKLMAMLDAAVKGLNNPDKLVPVLQDLA
RRHVQYGVKTHHFSPVGNALLYTLAEGLGDKFTKEVKDAWIAVLHLVADVMKAEMKKQGCA

Sequences:

>Translated_141_residues
MSLTNDQISLINQSFGLVRPIADDAAALFYRNLFEIDPSLRSLFKSDLKIQGRKLMAMLDAAVKGLNNPDKLVPVLQDLA
RRHVQYGVKTHHFSPVGNALLYTLAEGLGDKFTKEVKDAWIAVLHLVADVMKAEMKKQGCA
>Mature_140_residues
SLTNDQISLINQSFGLVRPIADDAAALFYRNLFEIDPSLRSLFKSDLKIQGRKLMAMLDAAVKGLNNPDKLVPVLQDLAR
RHVQYGVKTHHFSPVGNALLYTLAEGLGDKFTKEVKDAWIAVLHLVADVMKAEMKKQGCA

Specific function: Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a centra

COG id: COG1017

COG function: function code C; Hemoglobin-like flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR000971
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00042 Globin; PF00175 NAD_binding_1 [H]

EC number: =1.14.12.17 [H]

Molecular weight: Translated: 15651; Mature: 15519

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS01033 GLOBIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTNDQISLINQSFGLVRPIADDAAALFYRNLFEIDPSLRSLFKSDLKIQGRKLMAMLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AAVKGLNNPDKLVPVLQDLARRHVQYGVKTHHFSPVGNALLYTLAEGLGDKFTKEVKDAW
HHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVLHLVADVMKAEMKKQGCA
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLTNDQISLINQSFGLVRPIADDAAALFYRNLFEIDPSLRSLFKSDLKIQGRKLMAMLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AAVKGLNNPDKLVPVLQDLARRHVQYGVKTHHFSPVGNALLYTLAEGLGDKFTKEVKDAW
HHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVLHLVADVMKAEMKKQGCA
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]