Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is ubiE [C]

Identifier: 119776588

GI number: 119776588

Start: 4085549

End: 4086304

Strand: Reverse

Name: ubiE [C]

Synonym: Sama_3456

Alternate gene names: 119776588

Gene position: 4086304-4085549 (Counterclockwise)

Preceding gene: 119776590

Following gene: 119776587

Centisome position: 94.89

GC content: 53.97

Gene sequence:

>756_bases
ATGAAAACTGTCACTGTATTGAGTTTGTTGGCCTTGAGCCTTTGGGCGAGTTCGTCGGTCGATGCACGGGAAATCGGACC
GCATATTCGAAATGCCATGACCGATAACGCCCGGCCGGAAGCAGACAGGGGGCGGGATATTCAGCGTAAGCCGGACCTCA
TCCTGAGTTACTTTGAGGTGGAACCCGGGCAAAAGGTACTGGACCTCTTTTCCGGTGGTGGCTATTACACCGAGCTGCTT
GCCCGTGCAGTTGGAAGCGGTGGCCGGGTGGTGGCCCATAACAACCAGGCTTATCTGCCGTTTGCCGGAGAAGAACTCAA
GCAAAGGGATTACGCTGCCCGCCTGCCTAACGTGGAAACCCTCTTGGCAGAAGCGAATGACCTGCACTTTGTTGACGGGA
GTTTTGACCGGATTTTTTTCGTGCTGGGATTTCATGATGCGCTCTACAGCACCCAGGATTGGCCTGCTATCGACGTGGAT
AAGCTGGTGGCCTTGATGCAGCAGTCGCTTAAGCCCGGTGGTCAGGTTGCGATTATTGACCACAGAGCAAAGCCCGGCAG
CGGTGCTGAAGTGGCAGAGCAGCTGCATCGTATGGATCCCGCCCTGGTGATAAAAAAAATGACCGAGGCAGGTTTCAGGT
TCGATGGAGAGCTGGATGCGCTGGCCAACAAGGCCGATCCGCTGGATATCTCAGTATTTGATAAAAGAATACGGGGCCAC
AGCGACAGATTCGTACTTAAGTTTACTAAACCCTGA

Upstream 100 bases:

>100_bases
TACATTTTTCCTCAATAAAAGCAAATATTTACAAATAATAAACAGATAAAAAACCTTTTATTTACCAAAATGGTGGTGCG
AATCACTTTTGGGGGAAAAT

Downstream 100 bases:

>100_bases
ACCCGGCTGGTGGCTGAATCTTCTGGACTATAGTTTATCTGTTACCCAGAGGAGAAAGTCCCATGCATTCAGCCGCACTG
CTTCAAAAAGTTGATGAATT

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Methyltransferase-Like Protein; Methyltransferase Type; O-Methyltransferase

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEVEPGQKVLDLFSGGGYYTELL
ARAVGSGGRVVAHNNQAYLPFAGEELKQRDYAARLPNVETLLAEANDLHFVDGSFDRIFFVLGFHDALYSTQDWPAIDVD
KLVALMQQSLKPGGQVAIIDHRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDALANKADPLDISVFDKRIRGH
SDRFVLKFTKP

Sequences:

>Translated_251_residues
MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEVEPGQKVLDLFSGGGYYTELL
ARAVGSGGRVVAHNNQAYLPFAGEELKQRDYAARLPNVETLLAEANDLHFVDGSFDRIFFVLGFHDALYSTQDWPAIDVD
KLVALMQQSLKPGGQVAIIDHRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDALANKADPLDISVFDKRIRGH
SDRFVLKFTKP
>Mature_251_residues
MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEVEPGQKVLDLFSGGGYYTELL
ARAVGSGGRVVAHNNQAYLPFAGEELKQRDYAARLPNVETLLAEANDLHFVDGSFDRIFFVLGFHDALYSTQDWPAIDVD
KLVALMQQSLKPGGQVAIIDHRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDALANKADPLDISVFDKRIRGH
SDRFVLKFTKP

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: COG4798

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27777; Mature: 27777

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEV
CCHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC
EPGQKVLDLFSGGGYYTELLARAVGSGGRVVAHNNQAYLPFAGEELKQRDYAARLPNVET
CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHCCCHHH
LLAEANDLHFVDGSFDRIFFVLGFHDALYSTQDWPAIDVDKLVALMQQSLKPGGQVAIID
HHHCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
HRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDALANKADPLDISVFDKRIRGH
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCC
SDRFVLKFTKP
CCCEEEEECCC
>Mature Secondary Structure
MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEV
CCHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC
EPGQKVLDLFSGGGYYTELLARAVGSGGRVVAHNNQAYLPFAGEELKQRDYAARLPNVET
CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHCCCHHH
LLAEANDLHFVDGSFDRIFFVLGFHDALYSTQDWPAIDVDKLVALMQQSLKPGGQVAIID
HHHCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
HRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDALANKADPLDISVFDKRIRGH
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCC
SDRFVLKFTKP
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA