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The map label for this gene is rsmI [H]

Identifier: 119776485

GI number: 119776485

Start: 3981266

End: 3982111

Strand: Reverse

Name: rsmI [H]

Synonym: Sama_3353

Alternate gene names: 119776485

Gene position: 3982111-3981266 (Counterclockwise)

Preceding gene: 119776490

Following gene: 119776482

Centisome position: 92.48

GC content: 56.26

Gene sequence:

>846_bases
ATGTCCCTGCCCCCAGCGCTTTATATCGTTCCGACCCCCATAGGCAACCTGGGAGACATGAGCCCGAGGGCCGTTGAAAT
CCTCCAATCCGTGAGTTTGATAGCCTGCGAAGACACCCGCCATTCGGGTCGACTCTTCAGCCATTTTGGTATCAGCACCC
GTACCACGTCGGTGCACGATCACAACGAGCGTGCCCGTGCCCAGTGGATTATTGAGAAACTGAGTCAGGGTGACGCCGTG
GCGCTGGTGAGTGATGCAGGCACGCCGCTGATATCTGACCCCGGCTATCATCTGGTGTCCCAGGTGCGTGAAGCTGGATT
TGCCGTGATCCCTTTGCCAGGCCCCTGCGCCGCGATTACTGCGCTCAGTGCGTCTGGCCTGCCTTCCGACCGCTTCTCAT
TTGAGGGCTTCCTGCCTGCCAAAGACAAGGGCCGCAACGATAAGCTGACTGCGCTGCGGGAAGATCCGCGCACCCTGATT
TTTTACGAATCCCCCCACCGTATTCTGCAAACACTCGAAGCCATAGTGGCTGTGCTGGGTGGCGAAAGGCCCATGGTGAT
GGCGCGGGAGCTGACCAAGACCTTCGAAACTTTTTTGAGTGGTACTGCGGCCGAGGTATTGGAGAAGGTAAAGAGTGATG
ACAATCAGCAAAAAGGTGAGATGGTGCTGATGTGCCACGGCTTTGTGGCCGAGGAAACTGAAGAAGCCATTCCGGCCAAG
GCGATGGAAACACTGGCACTACTGGCCACTGAATTGCCACTGAAAAAGGCCGCCGCCATGGCTGCACAAATTCATGATTT
GAAGAAAAACGCCCTCTATAAAGCGGGTCTGGATGCCGGATTGTAA

Upstream 100 bases:

>100_bases
GCTTTTCAACACTTGGCTTCACTCTGGTAATATGCTGAGCTCAGTTTAACCTTCTCCGGCCCGGGGTTAAAGCCTTGGCC
ATCATACTCCAGAGGTAATT

Downstream 100 bases:

>100_bases
CATCTGAACCGAGGGGGAGGTCGAAAGCCCTTGGTGAGCTGGGATGCTTAGGCTATAATCCGCGCCGAGTCGACTGGGCA
GTCGCTGCGCTCGCAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHDHNERARAQWIIEKLSQGDAV
ALVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAITALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLI
FYESPHRILQTLEAIVAVLGGERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAK
AMETLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL

Sequences:

>Translated_281_residues
MSLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHDHNERARAQWIIEKLSQGDAV
ALVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAITALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLI
FYESPHRILQTLEAIVAVLGGERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAK
AMETLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL
>Mature_280_residues
SLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHDHNERARAQWIIEKLSQGDAVA
LVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAITALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLIF
YESPHRILQTLEAIVAVLGGERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAKA
METLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=272, Percent_Identity=64.3382352941177, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30298; Mature: 30167

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHD
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCEECCCCC
HNERARAQWIIEKLSQGDAVALVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAIT
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHH
ALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLIFYESPHRILQTLEAIVAVLG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHC
GERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAK
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCHH
AMETLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHD
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCEECCCCC
HNERARAQWIIEKLSQGDAVALVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAIT
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHH
ALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLIFYESPHRILQTLEAIVAVLG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHC
GERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAK
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCHH
AMETLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]