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The map label for this gene is yggE [H]

Identifier: 119776442

GI number: 119776442

Start: 3939305

End: 3940057

Strand: Reverse

Name: yggE [H]

Synonym: Sama_3310

Alternate gene names: 119776442

Gene position: 3940057-3939305 (Counterclockwise)

Preceding gene: 119776445

Following gene: 119776439

Centisome position: 91.5

GC content: 49.27

Gene sequence:

>753_bases
ATGGGATGTCTACATGGAGGTTTTATGAAGTATTTCTGTTTGTTAGCATTGGTGGCTTTTTCTGCTCTATCACATGCAAA
CAATAGTTTGCCTAACAACCGCCACATAGCTGTGGTCGGCAATGCGCAGATCAGTGCCACACCGGATATTGCTGTGATCC
ACCTCGAAGTTGAAAGCTTAAAAGGCAGCAGTGCCGAGGCCAAGACGGATGTCGATGATAGAGTCAACAAGCTGCTGGCG
GGCCTTGGCAAATTTAAGGTGGATGAGAAAAATGTCTCTGCATCCAGCATCGCCACGGCACCAGTTTATTCCTACGGCGA
CAACAACAAGCGCGTGCTGGATGGTTACCGTGCCAGCCGCAATTTAACGATAACCCTGAATAAACTGGATAACCTTAATG
CATTGATGGATTTCGCTCTCAGTGTGAAGATTGATGAAATAGATCGGGTAGAGCTTAAATCGTCAAAAGAAGTCGAGCTC
AAGAATGAGGCCAGTGCTTTGGCCGTTGCCAATGCAACAGAAAAAGGGCGTATGCTGGCCAGCGCGTTTGGGGCAACACT
TGGCAGCGTCTACAGTATTGGCTCTGCCGAGGATGGCAGTTATGGCCGCTATGGCGCCAACAGTGGCATAGAGCGCATAG
AGGTAACAGGTTCCAGACTGGCAAAGCCCCGTGTTACGGGAAAATACCTGCAGGAAAACATGGTGTTTTCGGCCTCTGTC
GGTGTGGTATTTGACCTCGAGGTGAACCAATAG

Upstream 100 bases:

>100_bases
GGGGATGAGTACGGTGCTAGCTTCAATCTCGGTGGTGTTCCTGCGGCCACGTTGAGCGGGTCTGGGTGCTATCGTCGCAG
TGGTGAATTAGGTTACATTG

Downstream 100 bases:

>100_bases
TCACTTGCCGGGTTACTCGTCCGTTAAGCAGTATTGGTTTTTCCCGGCCTTTTTGGCCCTGTACATACGCTTGTCTGCCA
GAGAAAGCAGGGCATCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MGCLHGGFMKYFCLLALVAFSALSHANNSLPNNRHIAVVGNAQISATPDIAVIHLEVESLKGSSAEAKTDVDDRVNKLLA
GLGKFKVDEKNVSASSIATAPVYSYGDNNKRVLDGYRASRNLTITLNKLDNLNALMDFALSVKIDEIDRVELKSSKEVEL
KNEASALAVANATEKGRMLASAFGATLGSVYSIGSAEDGSYGRYGANSGIERIEVTGSRLAKPRVTGKYLQENMVFSASV
GVVFDLEVNQ

Sequences:

>Translated_250_residues
MGCLHGGFMKYFCLLALVAFSALSHANNSLPNNRHIAVVGNAQISATPDIAVIHLEVESLKGSSAEAKTDVDDRVNKLLA
GLGKFKVDEKNVSASSIATAPVYSYGDNNKRVLDGYRASRNLTITLNKLDNLNALMDFALSVKIDEIDRVELKSSKEVEL
KNEASALAVANATEKGRMLASAFGATLGSVYSIGSAEDGSYGRYGANSGIERIEVTGSRLAKPRVTGKYLQENMVFSASV
GVVFDLEVNQ
>Mature_249_residues
GCLHGGFMKYFCLLALVAFSALSHANNSLPNNRHIAVVGNAQISATPDIAVIHLEVESLKGSSAEAKTDVDDRVNKLLAG
LGKFKVDEKNVSASSIATAPVYSYGDNNKRVLDGYRASRNLTITLNKLDNLNALMDFALSVKIDEIDRVELKSSKEVELK
NEASALAVANATEKGRMLASAFGATLGSVYSIGSAEDGSYGRYGANSGIERIEVTGSRLAKPRVTGKYLQENMVFSASVG
VVFDLEVNQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=239, Percent_Identity=32.2175732217573, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 26697; Mature: 26565

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCLHGGFMKYFCLLALVAFSALSHANNSLPNNRHIAVVGNAQISATPDIAVIHLEVESL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEEEEEEEEECC
KGSSAEAKTDVDDRVNKLLAGLGKFKVDEKNVSASSIATAPVYSYGDNNKRVLDGYRASR
CCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHEECCCEEEECCCCCEEEECCCCCC
NLTITLNKLDNLNALMDFALSVKIDEIDRVELKSSKEVELKNEASALAVANATEKGRMLA
EEEEEEECCCCHHHHHHHHHEEEECCCCEEECCCCCCEEECCCCCEEEEECCCHHHHHHH
SAFGATLGSVYSIGSAEDGSYGRYGANSGIERIEVTGSRLAKPRVTGKYLQENMVFSASV
HHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHCEEEEECC
GVVFDLEVNQ
CEEEEEEECC
>Mature Secondary Structure 
GCLHGGFMKYFCLLALVAFSALSHANNSLPNNRHIAVVGNAQISATPDIAVIHLEVESL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEEEEEEEEECC
KGSSAEAKTDVDDRVNKLLAGLGKFKVDEKNVSASSIATAPVYSYGDNNKRVLDGYRASR
CCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHEECCCEEEECCCCCEEEECCCCCC
NLTITLNKLDNLNALMDFALSVKIDEIDRVELKSSKEVELKNEASALAVANATEKGRMLA
EEEEEEECCCCHHHHHHHHHEEEECCCCEEECCCCCCEEECCCCCEEEEECCCHHHHHHH
SAFGATLGSVYSIGSAEDGSYGRYGANSGIERIEVTGSRLAKPRVTGKYLQENMVFSASV
HHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHCEEEEECC
GVVFDLEVNQ
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086 [H]