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The map label for this gene is ybbK [H]

Identifier: 119776424

GI number: 119776424

Start: 3912502

End: 3912981

Strand: Reverse

Name: ybbK [H]

Synonym: Sama_3292

Alternate gene names: 119776424

Gene position: 3912981-3912502 (Counterclockwise)

Preceding gene: 119776431

Following gene: 119776421

Centisome position: 90.87

GC content: 57.71

Gene sequence:

>480_bases
ATGGAAAAGATTTTGGTGAGCGCCTGTCTGCTGGGCGAAGCGGTGCGATACGATGGTAAAGATAATTTGGTGGAGTCGTC
CCTGTGGCAAGGCTGGCAGCAACAGGGACGCTTGGTTGGCATCTGCCCCGAGTGCGCCGGCGGTTTGCCCACGCCCCGCC
CGCCGGCAGAAATACAAGCGCCAGACCCAAAGCAGGCCATTCGGGTCATCACAGAGACGGGGGAGGATGTGACAGATGCC
TTCGTGCGGGGCGCTGAAGCTGCTTTAAGGCTTGCCCGAAAGGAAAATATTCGTTTTGCCATTCTCAAAGCCCGCAGCCC
GTCCTGCGGCAAGGGGCTGATTTACGATGGCAGCTTTTCCCGTACCCTGAGTGAGGGCGACGGCATTACCGCAGCGCTGC
TGAGTCAGCACGGCATAGAAGTCTTTACCGAGTATCAGCTGCAACAATTGACTGAGCGGCTGGTGCAGATTGGTGATTGA

Upstream 100 bases:

>100_bases
TCTGTAAGGCATGGGATGATGTGGCCATCAGCCAATCAAGGGTAGCTGTGGTGGACGTATTTCGCTTCAAAAGCCGCGGC
CCTGTTAGAGCAAAGAAACG

Downstream 100 bases:

>100_bases
GTTGGGTCAGCGGTCTCTGGTGTGACAATTGGCTTATAAATAATTGGGTTAAGCGAGCACTGTCTTCCTCGGGAAATAAA
CGTGAGCCATAGCCACCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEKILVSACLLGEAVRYDGKDNLVESSLWQGWQQQGRLVGICPECAGGLPTPRPPAEIQAPDPKQAIRVITETGEDVTDA
FVRGAEAALRLARKENIRFAILKARSPSCGKGLIYDGSFSRTLSEGDGITAALLSQHGIEVFTEYQLQQLTERLVQIGD

Sequences:

>Translated_159_residues
MEKILVSACLLGEAVRYDGKDNLVESSLWQGWQQQGRLVGICPECAGGLPTPRPPAEIQAPDPKQAIRVITETGEDVTDA
FVRGAEAALRLARKENIRFAILKARSPSCGKGLIYDGSFSRTLSEGDGITAALLSQHGIEVFTEYQLQQLTERLVQIGD
>Mature_159_residues
MEKILVSACLLGEAVRYDGKDNLVESSLWQGWQQQGRLVGICPECAGGLPTPRPPAEIQAPDPKQAIRVITETGEDVTDA
FVRGAEAALRLARKENIRFAILKARSPSCGKGLIYDGSFSRTLSEGDGITAALLSQHGIEVFTEYQLQQLTERLVQIGD

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 17283; Mature: 17283

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKILVSACLLGEAVRYDGKDNLVESSLWQGWQQQGRLVGICPECAGGLPTPRPPAEIQA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCCCC
PDPKQAIRVITETGEDVTDAFVRGAEAALRLARKENIRFAILKARSPSCGKGLIYDGSFS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCC
RTLSEGDGITAALLSQHGIEVFTEYQLQQLTERLVQIGD
HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKILVSACLLGEAVRYDGKDNLVESSLWQGWQQQGRLVGICPECAGGLPTPRPPAEIQA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCCCC
PDPKQAIRVITETGEDVTDAFVRGAEAALRLARKENIRFAILKARSPSCGKGLIYDGSFS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCC
RTLSEGDGITAALLSQHGIEVFTEYQLQQLTERLVQIGD
HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]