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The map label for this gene is yaeJ [H]

Identifier: 119776325

GI number: 119776325

Start: 3786280

End: 3786693

Strand: Direct

Name: yaeJ [H]

Synonym: Sama_3193

Alternate gene names: 119776325

Gene position: 3786280-3786693 (Clockwise)

Preceding gene: 119776316

Following gene: 119776326

Centisome position: 87.93

GC content: 55.56

Gene sequence:

>414_bases
ATGATCACAATCTCACAGCGCGTTCAACTTCAGGACCAGGAAATCGAATGGCAGTTCATCCGTTCCAGTGGGGCCGGTGG
CCAGAACGTGAACAAAGTCTCCACCTGCGCCCAGCTAATCTTCGATATCCGCGCCTCGTCATTGCCGGAGTTTTATAAAG
AAAAACTGCTGGCCAGGAGCGACCATCGCATCACCCAAAGCGGCAAAATCATTATCAAGTGTCAGGAGAGTCGCAGCCAG
GAGGCCAACCGCGAGACCGCGCTGGCACAATTTATTGCCCTGGTGCAATCGGTCAATCAGGTACAGAAAAAGCGTATTCC
CACCAAGGCCACCCGCGCCAGCCAAAAGCGCCGGGTCGATACCAAGAAGCAGCGGGCTTCCACCAAGGCCATGCGCGGCA
AGGTCAGCTACTGA

Upstream 100 bases:

>100_bases
GGCATAACATAGAGGTTCTCCCTGGAGCAGGCTCGGCCATGTGCCGAGGTTGCCGATAATAACAAATTCTTTCCGCTCAC
ATTAAGCCAAAACTTAGGCC

Downstream 100 bases:

>100_bases
GAAACCCTTTCCTGCCTGCTTAAGATTAATTGCATTGAAAATGCAGGCAAGTTTGGCGATATTGGGCCTTATTGAGTTCA
ACATGTCGATAACTGACAAA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MITISQRVQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARSDHRITQSGKIIIKCQESRSQ
EANRETALAQFIALVQSVNQVQKKRIPTKATRASQKRRVDTKKQRASTKAMRGKVSY

Sequences:

>Translated_137_residues
MITISQRVQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARSDHRITQSGKIIIKCQESRSQ
EANRETALAQFIALVQSVNQVQKKRIPTKATRASQKRRVDTKKQRASTKAMRGKVSY
>Mature_137_residues
MITISQRVQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARSDHRITQSGKIIIKCQESRSQ
EANRETALAQFIALVQSVNQVQKKRIPTKATRASQKRRVDTKKQRASTKAMRGKVSY

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=57.037037037037, Blast_Score=158, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15596; Mature: 15596

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITISQRVQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARS
CCCCCCHHCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
DHRITQSGKIIIKCQESRSQEANRETALAQFIALVQSVNQVQKKRIPTKATRASQKRRVD
CCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKKQRASTKAMRGKVSY
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITISQRVQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARS
CCCCCCHHCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
DHRITQSGKIIIKCQESRSQEANRETALAQFIALVQSVNQVQKKRIPTKATRASQKRRVD
CCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKKQRASTKAMRGKVSY
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]