| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776323
Identifier: 119776323
GI number: 119776323
Start: 3785611
End: 3785787
Strand: Reverse
Name: 119776323
Synonym: Sama_3191
Alternate gene names: NA
Gene position: 3785787-3785611 (Counterclockwise)
Preceding gene: 119776324
Following gene: 119776322
Centisome position: 87.92
GC content: 57.06
Gene sequence:
>177_bases ATGAATAAGCTGACACTGGCCAAGATCGCCGCCGCTCTGACTCTGGTTGCCGGCCTCGCCGCCTGTGCCCCTGAAGTGGG CAGCGAAGCCTGGTGTAAAAAGATGGAAGACAAGCCAAAGGGCGACTGGACTGCCAACGAGGCATCTGATTACGCCAAAC ACTGCGTCTTCAGGTAA
Upstream 100 bases:
>100_bases CTGGTTTCCCCTGCAGGATAAGGCGAAGGCCATTGCCTGGATCCAAAAGCGATCGCTAATCAAGGCATGAAAAATCAATA TATTACAAGGAAGCGCTACA
Downstream 100 bases:
>100_bases GCATGTCAGTAACCGGGGGAACTGTCTCAGGTTTCCCCGGTCTTAATGTGTGTCTCGTGTTTTGTCACCTCTCCCCAAGC CGAGGATTGATTTGATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR
Sequences:
>Translated_58_residues MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR >Mature_58_residues MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6225; Mature: 6225
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA