Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776323

Identifier: 119776323

GI number: 119776323

Start: 3785611

End: 3785787

Strand: Reverse

Name: 119776323

Synonym: Sama_3191

Alternate gene names: NA

Gene position: 3785787-3785611 (Counterclockwise)

Preceding gene: 119776324

Following gene: 119776322

Centisome position: 87.92

GC content: 57.06

Gene sequence:

>177_bases
ATGAATAAGCTGACACTGGCCAAGATCGCCGCCGCTCTGACTCTGGTTGCCGGCCTCGCCGCCTGTGCCCCTGAAGTGGG
CAGCGAAGCCTGGTGTAAAAAGATGGAAGACAAGCCAAAGGGCGACTGGACTGCCAACGAGGCATCTGATTACGCCAAAC
ACTGCGTCTTCAGGTAA

Upstream 100 bases:

>100_bases
CTGGTTTCCCCTGCAGGATAAGGCGAAGGCCATTGCCTGGATCCAAAAGCGATCGCTAATCAAGGCATGAAAAATCAATA
TATTACAAGGAAGCGCTACA

Downstream 100 bases:

>100_bases
GCATGTCAGTAACCGGGGGAACTGTCTCAGGTTTCCCCGGTCTTAATGTGTGTCTCGTGTTTTGTCACCTCTCCCCAAGC
CGAGGATTGATTTGATTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR

Sequences:

>Translated_58_residues
MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR
>Mature_58_residues
MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6225; Mature: 6225

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNKLTLAKIAAALTLVAGLAACAPEVGSEAWCKKMEDKPKGDWTANEASDYAKHCVFR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA