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The map label for this gene is tap [C]

Identifier: 119776317

GI number: 119776317

Start: 3776833

End: 3777915

Strand: Reverse

Name: tap [C]

Synonym: Sama_3185

Alternate gene names: 119776317

Gene position: 3777915-3776833 (Counterclockwise)

Preceding gene: 119776318

Following gene: 119776314

Centisome position: 87.73

GC content: 55.4

Gene sequence:

>1083_bases
ATGTTTTTTGGAAGGAAGCTGAAAGAAGAAAACGCCTCGTTGAGGCAAAGCCTTAAGGAACAGGCGAGCCGCCATCAGGC
TGAGATAGCCGAGCTTAAGCAGGTCATTGCCGATTTTGAGTCTGCTCAGAAACTATCGAGAGAGCATCTGTACAACTTTT
CTCAGGTCATTGCCTGTCAGAATCAGGGGGGCGACATGCTGCAAACCGTGCGCGATGCCCTGGCCGGCAACGCAGACGAG
TTGCTGCATGAACGGGACGCGCTGCGTCAGGTGGATGCCTTGTTCTCACAAACCCGCAGTGCCGTCGAGAGTTTGGGCAG
CCGAGCCGACGTGATCAATGAAGAGGCCGGTCGCAGCCGTGCGGCGGTGGAGCTGCTGGACAGTACTACCTCGGCCATCA
ATCAGTTTGTTACCGCCATTCAGGGTATTTCAGAACAAACCAACCTGTTGGCGCTTAACGCTGCCATCGAAGCGGCCCGC
GCCGGTGAAGCTGGACGTGGTTTTGCCGTGGTGGCCGATGAGGTTCGTCAGTTGGCCAGCAAGGCCCACAGTGCCAGCAG
TCAAATAGAAATGTTGGTCAGGAAAATCGTCTCTCAGGCGGCGGACATCAAGCAGATTATCGATGCCAATCAAAGCAGTG
CCGCTGATGTAGCGACCTCTTCTGCCCAGATTTCCACTGTGGTGGCTGATGTACTTATCCAAAGCCAGCAAATGCAGAAG
GTGATTGAGCACTCGGCGATGATTGCGTTTTTGAATACCACCAAGCTGGATCATGCCGTGTGGAAATCGGATATCTACCG
CAAGCTGGAAAGGCAGGCGTTTCACGAGCATGTGACCGACCATAAAGAGTGCCGTTTGGGTAAGTGGTACAGCCAGGGGC
AGGGGGCAGAACTCTATTCCCATGTGAGTGGCTACCGGGAGCTGGACGCCCCGCACCGCAGGGTGCACGAACAGGGCGCT
GCGGCACTGGATGCGCGTCGAAAGGGGGATTTCAAGGCCATGGTGAATCATTTGGATGCCATGGAGGCCGCCAGTTTGCA
GGTAGTGCACTGTATCGACAGGTTAATGAACCAGCGCCACTAA

Upstream 100 bases:

>100_bases
CAGTCTGTCGCAGTCTTTAGGCGCCGCGTCTGCAAAATGTCGGCAGATTGCCGATAATGGAACAGCGGTTGGTTATTTTT
GGTTTATTTTTGGGGGCATT

Downstream 100 bases:

>100_bases
CGCCGGGGCGACATGGTGAATGGTGCTTCAAAACCCCGCTCCTTAACGGGGGTTTGTCATCAGGCGTGCTGAACGCTTGC
CAGAGACAAAGTGCGCTATG

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MFFGRKLKEENASLRQSLKEQASRHQAEIAELKQVIADFESAQKLSREHLYNFSQVIACQNQGGDMLQTVRDALAGNADE
LLHERDALRQVDALFSQTRSAVESLGSRADVINEEAGRSRAAVELLDSTTSAINQFVTAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHSASSQIEMLVRKIVSQAADIKQIIDANQSSAADVATSSAQISTVVADVLIQSQQMQK
VIEHSAMIAFLNTTKLDHAVWKSDIYRKLERQAFHEHVTDHKECRLGKWYSQGQGAELYSHVSGYRELDAPHRRVHEQGA
AALDARRKGDFKAMVNHLDAMEAASLQVVHCIDRLMNQRH

Sequences:

>Translated_360_residues
MFFGRKLKEENASLRQSLKEQASRHQAEIAELKQVIADFESAQKLSREHLYNFSQVIACQNQGGDMLQTVRDALAGNADE
LLHERDALRQVDALFSQTRSAVESLGSRADVINEEAGRSRAAVELLDSTTSAINQFVTAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHSASSQIEMLVRKIVSQAADIKQIIDANQSSAADVATSSAQISTVVADVLIQSQQMQK
VIEHSAMIAFLNTTKLDHAVWKSDIYRKLERQAFHEHVTDHKECRLGKWYSQGQGAELYSHVSGYRELDAPHRRVHEQGA
AALDARRKGDFKAMVNHLDAMEAASLQVVHCIDRLMNQRH
>Mature_360_residues
MFFGRKLKEENASLRQSLKEQASRHQAEIAELKQVIADFESAQKLSREHLYNFSQVIACQNQGGDMLQTVRDALAGNADE
LLHERDALRQVDALFSQTRSAVESLGSRADVINEEAGRSRAAVELLDSTTSAINQFVTAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHSASSQIEMLVRKIVSQAADIKQIIDANQSSAADVATSSAQISTVVADVLIQSQQMQK
VIEHSAMIAFLNTTKLDHAVWKSDIYRKLERQAFHEHVTDHKECRLGKWYSQGQGAELYSHVSGYRELDAPHRRVHEQGA
AALDARRKGDFKAMVNHLDAMEAASLQVVHCIDRLMNQRH

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=121, Percent_Identity=37.1900826446281, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788195, Length=124, Percent_Identity=36.2903225806452, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787690, Length=116, Percent_Identity=42.2413793103448, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI2367378, Length=122, Percent_Identity=32.7868852459016, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789453, Length=74, Percent_Identity=52.7027027027027, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 39762; Mature: 39762

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFGRKLKEENASLRQSLKEQASRHQAEIAELKQVIADFESAQKLSREHLYNFSQVIACQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGGDMLQTVRDALAGNADELLHERDALRQVDALFSQTRSAVESLGSRADVINEEAGRSR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AAVELLDSTTSAINQFVTAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KAHSASSQIEMLVRKIVSQAADIKQIIDANQSSAADVATSSAQISTVVADVLIQSQQMQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEHSAMIAFLNTTKLDHAVWKSDIYRKLERQAFHEHVTDHKECRLGKWYSQGQGAELYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCHHHHH
HVSGYRELDAPHRRVHEQGAAALDARRKGDFKAMVNHLDAMEAASLQVVHCIDRLMNQRH
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFFGRKLKEENASLRQSLKEQASRHQAEIAELKQVIADFESAQKLSREHLYNFSQVIACQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGGDMLQTVRDALAGNADELLHERDALRQVDALFSQTRSAVESLGSRADVINEEAGRSR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AAVELLDSTTSAINQFVTAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KAHSASSQIEMLVRKIVSQAADIKQIIDANQSSAADVATSSAQISTVVADVLIQSQQMQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEHSAMIAFLNTTKLDHAVWKSDIYRKLERQAFHEHVTDHKECRLGKWYSQGQGAELYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCHHHHH
HVSGYRELDAPHRRVHEQGAAALDARRKGDFKAMVNHLDAMEAASLQVVHCIDRLMNQRH
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA