Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776284

Identifier: 119776284

GI number: 119776284

Start: 3739939

End: 3740247

Strand: Direct

Name: 119776284

Synonym: Sama_3152

Alternate gene names: NA

Gene position: 3739939-3740247 (Clockwise)

Preceding gene: 119776281

Following gene: 119776285

Centisome position: 86.85

GC content: 50.16

Gene sequence:

>309_bases
ATGCCATATACCAAGGTCCTTGAGCAACTGACCGAAAATCTGCAACTTGCCTATCGTCAGGCAATCGATGCCGACACCCG
TCTGGATGAACTGCAAAAAGCCGGCATGGGAAAGTTCAGCCATATATTCAGCGCGGAAGAAGGTTTTTCAACCCGCAGCA
ACAGGTTTGGCCCTTACGTTCAGGAGCTGGGTCAGGAATTTGCCAGCCTCAAGTCAGCTGAGCTAACCCCCGAATCATTA
GAGCGCGTGGTACGTAAACTCGGCGTATTGCTGCAAACCCTGCAAGCATTCAAATCCCAGAGTAAATAA

Upstream 100 bases:

>100_bases
ACAGCATCCAGAGTGCCGCTGCGCCAATGAACCCTGTCCTTAAACTTGTTGCCTTCATCCTTGCCTCTTATAATCCCGAA
AAATCTGATTGGAAGCTGTT

Downstream 100 bases:

>100_bases
GCGGTCATCTTTCTGTCATAAGGCTGCCATAGACTGCCGGAACCTTGGGCTCCCGGTACGAATGATGGCCGCCATAGATT
TAAAGGCAGAACTGACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MPYTKVLEQLTENLQLAYRQAIDADTRLDELQKAGMGKFSHIFSAEEGFSTRSNRFGPYVQELGQEFASLKSAELTPESL
ERVVRKLGVLLQTLQAFKSQSK

Sequences:

>Translated_102_residues
MPYTKVLEQLTENLQLAYRQAIDADTRLDELQKAGMGKFSHIFSAEEGFSTRSNRFGPYVQELGQEFASLKSAELTPESL
ERVVRKLGVLLQTLQAFKSQSK
>Mature_101_residues
PYTKVLEQLTENLQLAYRQAIDADTRLDELQKAGMGKFSHIFSAEEGFSTRSNRFGPYVQELGQEFASLKSAELTPESLE
RVVRKLGVLLQTLQAFKSQSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11541; Mature: 11410

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTKVLEQLTENLQLAYRQAIDADTRLDELQKAGMGKFSHIFSAEEGFSTRSNRFGPYV
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
QELGQEFASLKSAELTPESLERVVRKLGVLLQTLQAFKSQSK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYTKVLEQLTENLQLAYRQAIDADTRLDELQKAGMGKFSHIFSAEEGFSTRSNRFGPYV
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
QELGQEFASLKSAELTPESLERVVRKLGVLLQTLQAFKSQSK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA