Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 119776214

GI number: 119776214

Start: 3659041

End: 3660003

Strand: Direct

Name: yrbG [H]

Synonym: Sama_3082

Alternate gene names: 119776214

Gene position: 3659041-3660003 (Clockwise)

Preceding gene: 119776206

Following gene: 119776215

Centisome position: 84.97

GC content: 55.35

Gene sequence:

>963_bases
ATGTTACTCAACATCTTAATGCTTGTTGCAGGTCTGGCGGTTTTGGTATGGAGCGCCGACAAATTTGTTTACGGTGCCGC
AGCCTTCGCCCGTAATCTGGGCCTGCCCCCTATGCTCATTGGTCTGACGATTGTTGCCATGGGCAGTTCCGCCCCTGAAA
TGTTTGTGGCCGCCACTGCGTCTATGGATGGCATGCGCGATACCGCCGTGGGCAACGTGCTTGGCTCCAATGTCGCCAAC
ATCACCCTGATTTTGGGCTTGACCGCCATGATAGGCGCCATCGCCGTCAGCTCTCAAACCCTCAAGCGGGAAATTCCCAT
GATGCTGGCCGCCACGGCGCTGGCAGGTTATTTTCTCCATGATGGCTTCCTCACCCGCACCGAAGGTTGGGTCCTTATGG
GAGCCTTTTTACTGCTGATGCTGTATCTCATCTGGCATGCGCTGACCAACAAGGACCCGGACCCGCTGGCCGCTGAAGCC
GATGAAGAGATCCCAAGAGATGTGCCTACTTCCAAGGCCCTGATTTGGCTGGTTGTCGGCATAATACTTTTGCCGCTCTC
TGCCGATTGGATGGTGGATGGCGCCGTGGGCATCGCCAAATACTATGGCCTGTCGGATCTGGTTATTGGTCTCACCATTA
TTGCCGTGGGCACCAGTCTGCCTGAGCTTGCCGCCTGTGTGGCCAGCGCACTGAAGAAAGAAGATGACCTGGCAATAGGC
AATATTGTCGGCTCCAACATGTTTAACATCCTGGCTGTTCTCGCTCTGCCCGGCATCATCGCCCCCGGCGTAGTCGATGC
ACAGGCTGTCAGCCGTGACTTTTACATGGTAATGGCCACCAGCATCGCACTGGCGCTCTTTGTGCTTTTGAGCGGCAAAG
ATCGCGAACTCAAACGCTGGCACGGCGGTTTATTCCTTGTGGTATTTATCGGTTATCAGTTCGTGCTGTTCCAGGCACAC
TGA

Upstream 100 bases:

>100_bases
GGATTGCGACAACCGCTTACACACTTACAGCCCCGGATACTTTTAATTTGCCCGATTTCCAGCGAAAATGCGCCTTGGTA
TTCATGGATTTTGTCAATAA

Downstream 100 bases:

>100_bases
CCCTGATCTGTCGGTTTAATCCGGCACAGACAGAGAGACAGATATGGTAGACAGAAAACAACTGCGCCAATGGGGCAGCA
AGGTTATCGATATCGAAAAA

Product: K+-dependent Na+/Ca+ exchanger related-protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLLNILMLVAGLAVLVWSADKFVYGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATASMDGMRDTAVGNVLGSNVAN
ITLILGLTAMIGAIAVSSQTLKREIPMMLAATALAGYFLHDGFLTRTEGWVLMGAFLLLMLYLIWHALTNKDPDPLAAEA
DEEIPRDVPTSKALIWLVVGIILLPLSADWMVDGAVGIAKYYGLSDLVIGLTIIAVGTSLPELAACVASALKKEDDLAIG
NIVGSNMFNILAVLALPGIIAPGVVDAQAVSRDFYMVMATSIALALFVLLSGKDRELKRWHGGLFLVVFIGYQFVLFQAH

Sequences:

>Translated_320_residues
MLLNILMLVAGLAVLVWSADKFVYGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATASMDGMRDTAVGNVLGSNVAN
ITLILGLTAMIGAIAVSSQTLKREIPMMLAATALAGYFLHDGFLTRTEGWVLMGAFLLLMLYLIWHALTNKDPDPLAAEA
DEEIPRDVPTSKALIWLVVGIILLPLSADWMVDGAVGIAKYYGLSDLVIGLTIIAVGTSLPELAACVASALKKEDDLAIG
NIVGSNMFNILAVLALPGIIAPGVVDAQAVSRDFYMVMATSIALALFVLLSGKDRELKRWHGGLFLVVFIGYQFVLFQAH
>Mature_320_residues
MLLNILMLVAGLAVLVWSADKFVYGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATASMDGMRDTAVGNVLGSNVAN
ITLILGLTAMIGAIAVSSQTLKREIPMMLAATALAGYFLHDGFLTRTEGWVLMGAFLLLMLYLIWHALTNKDPDPLAAEA
DEEIPRDVPTSKALIWLVVGIILLPLSADWMVDGAVGIAKYYGLSDLVIGLTIIAVGTSLPELAACVASALKKEDDLAIG
NIVGSNMFNILAVLALPGIIAPGVVDAQAVSRDFYMVMATSIALALFVLLSGKDRELKRWHGGLFLVVFIGYQFVLFQAH

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=274, Percent_Identity=43.0656934306569, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 33907; Mature: 33907

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNILMLVAGLAVLVWSADKFVYGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATA
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHEEECC
SMDGMRDTAVGNVLGSNVANITLILGLTAMIGAIAVSSQTLKREIPMMLAATALAGYFLH
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFLTRTEGWVLMGAFLLLMLYLIWHALTNKDPDPLAAEADEEIPRDVPTSKALIWLVVG
CCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
IILLPLSADWMVDGAVGIAKYYGLSDLVIGLTIIAVGTSLPELAACVASALKKEDDLAIG
HHHHCCCCCCEECCHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
NIVGSNMFNILAVLALPGIIAPGVVDAQAVSRDFYMVMATSIALALFVLLSGKDRELKRW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HGGLFLVVFIGYQFVLFQAH
CCCCHHHHHHHHHHEEEECC
>Mature Secondary Structure
MLLNILMLVAGLAVLVWSADKFVYGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATA
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHEEECC
SMDGMRDTAVGNVLGSNVANITLILGLTAMIGAIAVSSQTLKREIPMMLAATALAGYFLH
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFLTRTEGWVLMGAFLLLMLYLIWHALTNKDPDPLAAEADEEIPRDVPTSKALIWLVVG
CCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
IILLPLSADWMVDGAVGIAKYYGLSDLVIGLTIIAVGTSLPELAACVASALKKEDDLAIG
HHHHCCCCCCEECCHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
NIVGSNMFNILAVLALPGIIAPGVVDAQAVSRDFYMVMATSIALALFVLLSGKDRELKRW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HGGLFLVVFIGYQFVLFQAH
CCCCHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]