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The map label for this gene is priB [H]

Identifier: 119776195

GI number: 119776195

Start: 3641561

End: 3641851

Strand: Reverse

Name: priB [H]

Synonym: Sama_3063

Alternate gene names: 119776195

Gene position: 3641851-3641561 (Counterclockwise)

Preceding gene: 119776196

Following gene: 119776194

Centisome position: 84.57

GC content: 48.8

Gene sequence:

>291_bases
TTGGTGCTGACTGGCTCTGTATTGAGAGTCAGACGCTTTAAAAGCCCAGCCGGGATCCCACACTGTGTGGTTCAGCTAGA
GCACCGAAGCCAACGTTTCGAAGCCGATTTGCCCAGAAACGTATATTGCCAAATTCAGGCAATCATGAGCGGTCAGCACT
TTGAGTGCATCACAGATAAATTGCAGGCAGGCATGGAGATCCAGGTAACAGGTTTCCTATCGACTCAACAGAGTCGGAGT
GGACAAAGTCGCTTGGTACTGCATGCCGAAAATGTCGAATTGAAATCTTAG

Upstream 100 bases:

>100_bases
TCGTCGTGCTGCCATCAGTGAGCGCTCTTCTGAGGCTGATGAAGTCGAAGAAAACGCTGAAGAATCTGCCGAGTAATTTC
TGTTTGTGACCGCAAACTCT

Downstream 100 bases:

>100_bases
GAGACTGTCACATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTCACCGCTGAAGGTGTTGCAGAGATCGATTAC
AAAGATATTGCTACTCTGAA

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MVLTGSVLRVRRFKSPAGIPHCVVQLEHRSQRFEADLPRNVYCQIQAIMSGQHFECITDKLQAGMEIQVTGFLSTQQSRS
GQSRLVLHAENVELKS

Sequences:

>Translated_96_residues
MVLTGSVLRVRRFKSPAGIPHCVVQLEHRSQRFEADLPRNVYCQIQAIMSGQHFECITDKLQAGMEIQVTGFLSTQQSRS
GQSRLVLHAENVELKS
>Mature_96_residues
MVLTGSVLRVRRFKSPAGIPHCVVQLEHRSQRFEADLPRNVYCQIQAIMSGQHFECITDKLQAGMEIQVTGFLSTQQSRS
GQSRLVLHAENVELKS

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790645, Length=95, Percent_Identity=45.2631578947368, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 10824; Mature: 10824

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTGSVLRVRRFKSPAGIPHCVVQLEHRSQRFEADLPRNVYCQIQAIMSGQHFECITDK
CEECCCHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
LQAGMEIQVTGFLSTQQSRSGQSRLVLHAENVELKS
HHCCCEEEEEEEEECCCCCCCCCEEEEEECCEEECC
>Mature Secondary Structure
MVLTGSVLRVRRFKSPAGIPHCVVQLEHRSQRFEADLPRNVYCQIQAIMSGQHFECITDK
CEECCCHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
LQAGMEIQVTGFLSTQQSRSGQSRLVLHAENVELKS
HHCCCEEEEEEEEECCCCCCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA