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The map label for this gene is icc [H]

Identifier: 119776177

GI number: 119776177

Start: 3623581

End: 3624420

Strand: Reverse

Name: icc [H]

Synonym: Sama_3045

Alternate gene names: 119776177

Gene position: 3624420-3623581 (Counterclockwise)

Preceding gene: 119776178

Following gene: 119776176

Centisome position: 84.17

GC content: 54.4

Gene sequence:

>840_bases
GTGCTGAAAGAGGCTGTTGAATATTCGTTGGCAGAAGGGGAAGCTGCGCGTCTGGTGCAGATCACCGATCCACATTTATT
TGCCAGCAACGACGGACAACTGCTGGGCGTGAACACCAGTCAGAGCCTGGCGGCTGTGCTCAATACCCTGAATGCCACCC
ATTATCCCGCGCACCTGATGCTCGCCACCGGTGACATCAGTCAGGATTACACTCCGGATTCTTACCGTAACTTCGTTCAG
GCCATCGAATTTCTTGGTCTACCTTGCCATTATTTGCCCGGAAACCATGACGATCCAAGGGTCATGAACCTGCATATGCA
GGGTCCCAGGGTCTTCGGGCAGCAGCGAATTCTGATTGGGAACTGGCATATTCTGATGCTGGACAGTACCGTGCGGGGAA
AGCCCGGAGGCCATATGGGGGAGCTGCAATTCTCCCTCATCGACCAGGCCATCGCAGCATACCCGAACCACCATACGCTG
CTTGTGATGCACCATAATCCCATTCTGATGGATTGCGCCTGGCTCGATCAGCACTGTATGGATAACGGCAGTGACTTTCT
CGCCAGGGTGTCTGCATACCCTCAGGTGAAGGGCATTCTCTGGGGCCATGTGCATCAGGCCGTGGATGAAGTGTATGCCA
CGGCCAATGGCCAGCTACCACTGATGGCCACCCCATCTACCTGTATTCAATTCAAACCCAAGTCACCTTACTTTGCCCTC
GATCATCTGCAGCCTGGCTACCGTTTGCTGGAGCTTTTGAGCGATGGTAGCATTCATACACATGTTTACCGTGTGCCGGG
TAATCGCTTTGCGCCGGACCACAGCTCCAGCGGTTACTGA

Upstream 100 bases:

>100_bases
AAGTGATGAAAAGTACCAGGTCAATGCATTCCTGGAAGAGTTATTGAAGATTGGTTGTCGATATCAGTCGGTTGTCCGGT
CTTAATTGTGGGTAAACATA

Downstream 100 bases:

>100_bases
GGTTCAGCAAACCGCAGCCTGAGGATGTATGCTGCTTTATATTCACGGATTCAACAGCTCCCCGCAGTCTGACAAAGGCC
TACAGAGTGCCAACTTTATT

Product: lacZ expression regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLKEAVEYSLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLMLATGDISQDYTPDSYRNFVQ
AIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIGNWHILMLDSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTL
LVMHHNPILMDCAWLDQHCMDNGSDFLARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFAL
DHLQPGYRLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY

Sequences:

>Translated_279_residues
MLKEAVEYSLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLMLATGDISQDYTPDSYRNFVQ
AIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIGNWHILMLDSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTL
LVMHHNPILMDCAWLDQHCMDNGSDFLARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFAL
DHLQPGYRLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY
>Mature_279_residues
MLKEAVEYSLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLMLATGDISQDYTPDSYRNFVQ
AIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIGNWHILMLDSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTL
LVMHHNPILMDCAWLDQHCMDNGSDFLARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFAL
DHLQPGYRLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=269, Percent_Identity=43.1226765799257, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 30982; Mature: 30982

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEAVEYSLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLM
CCCHHHHHHHCCCCCEEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCEEEE
LATGDISQDYTPDSYRNFVQAIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIG
EEECCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCEECCCCEEEEE
NWHILMLDSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTLLVMHHNPILMDCAWLDQHCM
CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHH
DNGSDFLARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFAL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEE
DHLQPGYRLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKEAVEYSLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLM
CCCHHHHHHHCCCCCEEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCEEEE
LATGDISQDYTPDSYRNFVQAIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIG
EEECCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCEECCCCEEEEE
NWHILMLDSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTLLVMHHNPILMDCAWLDQHCM
CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHH
DNGSDFLARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFAL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEE
DHLQPGYRLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]