| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mltA [H]
Identifier: 119776124
GI number: 119776124
Start: 3565041
End: 3566153
Strand: Reverse
Name: mltA [H]
Synonym: Sama_2992
Alternate gene names: 119776124
Gene position: 3566153-3565041 (Counterclockwise)
Preceding gene: 119776126
Following gene: 119776119
Centisome position: 82.82
GC content: 58.31
Gene sequence:
>1113_bases GTGAAATCAGCCCCGTTTAAATCTCTGAGTTGTGTCGTGTTGGCTGCCGTTATCAGTGCCTGTGCAAGTCAGCCAGACAG GGAGCTTGGCAAGCGTTATCTGGATGGTGAACTCCAGCAGCCGCTCAATTGGGTTGCAGCGGTGCAATCCGATGCCAATC GCAACTACACCCGCTTTGCCGACCAAAGCAGTTTGGTGCTTGAGCGTTCACCGCGTCTGGCCTCCCGTTACGCGCCCCTC TACCGGCAGCTGTCTCAGTGGCTTGAGAGTGGTGGCGATCCGCTTTCACTGGGGAATTTTGGGATTGAAGCGGCCCAGTT TGGTGGCGCCGATCGCCAGGGGCATGTGCTCTTTACCGGCTACTTTTCTCCAGTGCTGGAGGTGCGCCATAGCCCCGACA GCCGCTTTCAATACCCGCTTTATGGTGTGCCCGACTGTGTGAAACACAACTCGCCATGCCCAAGCCGCGAGGCCATTTTA CAGGGAGCACTGTCGGGGCAGGGGTTGGAGCTGGCCTACAGCGACAGCCTTATCGACAGTTTTCTGATGGAAGTGCAGGG CTCAGGCTTTGTCCATTATGGAGATAACGACGAGCTGCAATACCTGGGCTATGGCGGTAAAAATGGCCATGCGTACCGGA GCATAGGTAAAGTTTTGATTGAACAGGGTGAAGTGGCAAAAGAGCAAATGTCGCTGCGGGCCATTAAAGCCTGGGCCGAC AGCCATTCTGAAGACGAAGTGAAGCAACTGCTCGCCCACAATGCATCCTTTGTGTTTTTCCAGGCACGGCCCAACCATGA TGTCTTGGGCAGTGCAGGTATTCCCTTGTTACCCATGGCGGCCGTGGCGGCCGATAAACAGCTGCTGCCCATGGGCACGC CGCTGCTGGCCGAGGTGCCTTTGCTCGATGACGTAGGCAACTGGACCGGCAGGCATGAACTCCGGTTGCTGATTGCGCTG GATACCGGGGGCGCTGTGGATGGCGGCCACCTGGACCTTTACCACGGCATGGGGCCCGAGGCCGGAATGGCAGCAGGGCA CTACAAACACTTTGGCCGTGTATGGCGGCTGGGACTGGGCGCAGGCTCCAGTGTCACCCCGGGGACGCCCTGA
Upstream 100 bases:
>100_bases GAATCAGTCAAGCCGAAACTGGCTCTCCATGATGAATGGCTTTGCCTTTGTCCGGGATTTTTGGCATGGTGCCGCAATAT TTACCGGTTTGGAGCCAAAG
Downstream 100 bases:
>100_bases CCTCATCAGCCAGCGACATACAGGTAAGCCTGTGACAGGCACCTGCCGCTAAGTTTGTTGGGGTGTTTTTAAAAACAGCA CCAGCATAAGCACCATCGCC
Product: murein transglycosylase A
Products: Muramic Acid Residue [C]
Alternate protein names: Murein hydrolase A [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKSAPFKSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFADQSSLVLERSPRLASRYAPL YRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTGYFSPVLEVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAIL QGALSGQGLELAYSDSLIDSFLMEVQGSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWAD SHSEDEVKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVPLLDDVGNWTGRHELRLLIAL DTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLGAGSSVTPGTP
Sequences:
>Translated_370_residues MKSAPFKSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFADQSSLVLERSPRLASRYAPL YRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTGYFSPVLEVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAIL QGALSGQGLELAYSDSLIDSFLMEVQGSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWAD SHSEDEVKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVPLLDDVGNWTGRHELRLLIAL DTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLGAGSSVTPGTP >Mature_370_residues MKSAPFKSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFADQSSLVLERSPRLASRYAPL YRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTGYFSPVLEVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAIL QGALSGQGLELAYSDSLIDSFLMEVQGSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWAD SHSEDEVKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVPLLDDVGNWTGRHELRLLIAL DTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLGAGSSVTPGTP
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Degrades murein glycan strands and insoluble, high-molecular weight murein sacculi [H]
COG id: COG2821
COG function: function code M; Membrane-bound lytic murein transglycosylase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789179, Length=364, Percent_Identity=46.978021978022, Blast_Score=336, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010611 - InterPro: IPR014733 - InterPro: IPR005300 [H]
Pfam domain/function: PF06725 3D; PF03562 MltA [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 39974; Mature: 39974
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAPFKSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHC DQSSLVLERSPRLASRYAPLYRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTG CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCCCCCCEEEEE YFSPVLEVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAILQGALSGQGLELAYSDSLIDS CHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHH FLMEVQGSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWAD HHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC SHSEDEVKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVP CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCC LLDDVGNWTGRHELRLLIALDTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLG CHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEECC AGSSVTPGTP CCCCCCCCCC >Mature Secondary Structure MKSAPFKSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHC DQSSLVLERSPRLASRYAPLYRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTG CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCCCCCCEEEEE YFSPVLEVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAILQGALSGQGLELAYSDSLIDS CHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHH FLMEVQGSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWAD HHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC SHSEDEVKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVP CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCC LLDDVGNWTGRHELRLLIALDTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLG CHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEECC AGSSVTPGTP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]