| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mleN [H]
Identifier: 119776067
GI number: 119776067
Start: 3487928
End: 3489265
Strand: Direct
Name: mleN [H]
Synonym: Sama_2935
Alternate gene names: 119776067
Gene position: 3487928-3489265 (Clockwise)
Preceding gene: 119776066
Following gene: 119776068
Centisome position: 81.0
GC content: 54.56
Gene sequence:
>1338_bases TTGAATCAATCCCCAGACACTCAGGGCAACGCAAGTGCTGCTTCATTCGTTGCCCTGCTGCCACTGTTTCTGTTTTTGGC GCTTTTCATTGGCGCAGGTGTGTACTTCACCAGTCAGGGCGTGGACTTTGCCTTCTATCAGTTGCCCAGTGTAGTGGCTA TTCTGCCTGCCATAGTGCTGGCGCTGCTGCTGTCAAAGCAAAAGCTAAATCAGGCCATAGATACTTTTATCGGCGGTATT GGCCACAGCAATATCATTGCCATGTGCTTGATTTACTTGCTGGCGGGCGCCTTCGCCTCGGTAGCCAAGGCCACCGGAGG CGTGGATGCCACCGTCGCCCTTGGCCTGTCACTTATTCCCTCTGATCTGCTGCTGCCGGGCTTTTTTGTGATTGCCGCCT TTATTGCCACTGCCATGGGTACTTCCATGGGCACCATAGCTGCGGTTGCGCCCATTGCTTTGGGCGTGTCCCAGGAAGCC GATATTTCGCTGCCGCTGATGGCAGGTGCCATCATTTCCGGCGCCCTATTTGGTGATAACCTGTCCATCATTTCCGACAC CACCATTGCTGCAACCCGCACCCAGGGCTGCAACATGAAAGACAAATTCCGTGAGAACCTGATTTTCGCATTGCCAGCGT CACTCATCACCCTGCTGGCCTTTACCCTGGCGGGTCAGGGCGAAGCCAATGTGGCGCCTCAGTCGGTGGACTTTGTTAAG GTGCTGCCTTATCTGTGCATTCTGTTTTTGGCGGTCGCCGGGCTGAACGTGTTTGTGGTGCTGGGTATTGGTATTCTGCT GGCCGGTTTGGTGGGCATGTTCACCACCGACTACAGCTGGGTCAGCTTCAGCAAAGATATTTACGCCGGTTTTGGCAACA TGCAGGAAATCTTTATCCTGTCCATGTTAGTGGGTGGTCTGGCTGCGCTGATGCAGCAGCAGGGTGGCCTTGCCTTTGTC AGCCGCTTTATCGAAGGACTGATCGCCCGTTTTTCCAAGGCAAAGGGCGAAGCGTCCTGCCGCGCCGCTGAATTGGGTAT GGCAGGCATAGTGTCCCTGACCAACGCCTGTGTGGCCAACAACACAGTATCCATTGTGATAAGCGGTGATATCGCCCGGG ATCTCGCCCAGAAGCATGGCGTCAGCGCCAAGCGCAGCGCCAGCGTGCTCGATATATTTTCCTGTATTGTTCAAGGACTT ATACCGTATGGCGCCCAGGCACTTTTGATTGGGGCAACCTTTGCCATTACCCCCCTGGAGGCAGTATCCTATGCATGGTA CTGCATGATATTGGCGCTGGTAGCCGTTCTGATCGTGACATTCAGACAACGTCACTGA
Upstream 100 bases:
>100_bases AAGTTGTCGGGAGATGAAGCCGTAACGACACAAATATTCAGCGAAATCGCGGTGATGCAGGAAGAACCCGCCATTTCGCC CCCGATAAAGAGAGATAACC
Downstream 100 bases:
>100_bases GGATCAGGAGACTGCCACCCGGGAAAACCTATGACAATCAAAGACAGAAACGACTATGGACAATTTGATCCCCACCGGCT GGTGTTTCATATGTCCATTG
Product: Na+/H+ antiporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNQSPDTQGNASAASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVLALLLSKQKLNQAIDTFIGGI GHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIPSDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEA DISLPLMAGAIISGALFGDNLSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFTLAGQGEANVAPQSVDFVK VLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIFILSMLVGGLAALMQQQGGLAFV SRFIEGLIARFSKAKGEASCRAAELGMAGIVSLTNACVANNTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGL IPYGAQALLIGATFAITPLEAVSYAWYCMILALVAVLIVTFRQRH
Sequences:
>Translated_445_residues MNQSPDTQGNASAASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVLALLLSKQKLNQAIDTFIGGI GHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIPSDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEA DISLPLMAGAIISGALFGDNLSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFTLAGQGEANVAPQSVDFVK VLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIFILSMLVGGLAALMQQQGGLAFV SRFIEGLIARFSKAKGEASCRAAELGMAGIVSLTNACVANNTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGL IPYGAQALLIGATFAITPLEAVSYAWYCMILALVAVLIVTFRQRH >Mature_445_residues MNQSPDTQGNASAASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVLALLLSKQKLNQAIDTFIGGI GHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIPSDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEA DISLPLMAGAIISGALFGDNLSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFTLAGQGEANVAPQSVDFVK VLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIFILSMLVGGLAALMQQQGGLAFV SRFIEGLIARFSKAKGEASCRAAELGMAGIVSLTNACVANNTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGL IPYGAQALLIGATFAITPLEAVSYAWYCMILALVAVLIVTFRQRH
Specific function: Couples proton uptake and Na(+) efflux to the substrate- product malate/lactate antiport, in an electroneutral malate- 2H(+)/Na(+)-lactate exchange. Plays a role in supporting growth to high density on malate at reduced protonmotive force [H]
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004770 - InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 46275; Mature: 46275
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSPDTQGNASAASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHH ALLLSKQKLNQAIDTFIGGIGHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEADISLPLMAGAIISGALFGDN HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC LSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFTLAGQGEANVAPQSVDFVK CCEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH VLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHH SMLVGGLAALMQQQGGLAFVSRFIEGLIARFSKAKGEASCRAAELGMAGIVSLTNACVAN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC NTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGLIPYGAQALLIGATFAITPLE CCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH AVSYAWYCMILALVAVLIVTFRQRH HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQSPDTQGNASAASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHH ALLLSKQKLNQAIDTFIGGIGHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEADISLPLMAGAIISGALFGDN HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC LSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFTLAGQGEANVAPQSVDFVK CCEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH VLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHH SMLVGGLAALMQQQGGLAFVSRFIEGLIARFSKAKGEASCRAAELGMAGIVSLTNACVAN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC NTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGLIPYGAQALLIGATFAITPLE CCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH AVSYAWYCMILALVAVLIVTFRQRH HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10903309 [H]