Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is fixG [H]

Identifier: 119775967

GI number: 119775967

Start: 3372337

End: 3373875

Strand: Direct

Name: fixG [H]

Synonym: Sama_2835

Alternate gene names: 119775967

Gene position: 3372337-3373875 (Clockwise)

Preceding gene: 119775966

Following gene: 119775968

Centisome position: 78.31

GC content: 56.53

Gene sequence:

>1539_bases
GTGCAACAGAGTAATCAACCCCAGCAAAGCATTCCCGTTACTTTCATCCCCTCCAGTGAAGAGCCTTCAGCGCATAAGGA
GCCCTCTGCGTACAAGGAGCCTTCAGCGCACAAGGAGCCTTCAGCGCATAAGAAGCCTTCGGCGAATGGCGGACCATCGG
CCCCAAAAAAGCCGTCATCAAAAACGGAATCCAAAAGCGGCGGCAAAATTCAGTTTCGAAGCCAGCCAGGTCTGTTTCAG
CGTTGGCGCAGTGCCACCGGAACTGGCCTCATCGCGCTGTTTTTTCTGCTGCCCTTTATCAGCTGGCATGGGCGTCAGGC
CATTTGGTTTGATTTGAGCAATCAGCAGTTTTACTTCTTTGGCACCAGCCTGTGGCCCCAGGATTTTACCCTGCTGGCCT
GGGTCTTTATTGCCGCGGCCTTTGGTCTCTTTTTCGTGACCCTGTTTTGGGGCCGGGTCTGGTGCGGCTTTTTATGCCCG
CAAACCCAATGGACCTTTATGTTTGCCTGGGTCGAAGAAAAGTTTGAAGGCAGCCGCAATCAACGCATCAAGCTCGATAA
GGCGCCCTGGAGCCGGGAGAAGCTCAGCAAACGGCTTGGGAAACACAGCAGCTGGCTGCTGATGTCACTGCTCACTGGCT
GCGGCTTTATCGCCTATTTCGTGCCGGCGCGGGAGCTGTATCCCGCCATCTTCAGCTTCAGCGGAGGCTTTTGGGACACG
GCCTGGGTGTGGTTTTTTGCTATCTGCACCTACCTCAACGCCGGGTGGATGCGCGAGCAAATGTGCCTGCACTGCTGCCC
CTATGCCCGTTTCCAATCTGCCATGTTCGATGAGTTCACCAAAACCGTCACCTACGATGCTGCCCGTGGCGAAAGCCGTG
GACCACGCAAGCGCAAGGCCGCCACCGACCTTGGTGACTGCGTGGACTGTAATCTGTGTGTGGAGGTGTGCCCCACCGGC
ATCGATATCCGCAACGGCTTGCAGTATGAGTGCATCAACTGTGGCGCCTGTGTCGATGCCTGCAATCAGACCATGGCCAA
CTTTGGCTATAAGCCCGACCTTATCGCCTTCACCAGTGAACTGGGCCTCAAGGGTGCGACGCCGCCCCTTTGGCAGCGCA
AACGCTTTATCGGCTACGGCCTGGCGCTTGTGGCTATCCTCGCCACCATGGGACTGGACATGGCGAGTCGCAGCAGTATC
GAGCTCAATGTGCTGCGCGACCGCCAAAGCCTTTACCGTGAAACCACAGGCGGCCAGATTGAAAACACCTATCTGCTTAA
AATCCGCAATAAAACCCAGCAACCCAAGGAGTATCAACTGTCGGTGACAGGTGCACTGACGCTGGCAATGTCGAAAACTG
AGGTGAGCATTGCCCCCGGCGAGCAGGTTGAACTGCCCCTGACACTCACGGCGATGTCTGCAGACATTCAAAGAAGTCGC
ACCAAGCTCACCGTCACCGTCTCTGAGCTGGTGTCTGAGTCAGGGACTGATGGGGAGACAGAGGCCGTCAGTCAGGATTC
GGTGTTCTTCGCCCCCTGA

Upstream 100 bases:

>100_bases
TTGAGTCAAATGTTAATAAAATCAAAACAATAAACAGAATGCCCAGCTGGCACAGCTCTTGCCATTAGCCCCCTGTGTGA
GTCATTCAGGAACAACCAAG

Downstream 100 bases:

>100_bases
AAAGCAGGACGGCAAGCTGAGAAAGAGATGTGGGCCAGATCAAACTCCGATGCGGGAGTTGGCCCCTTTCACCTTGGCTT
AAGGGCACATCATTATGCTG

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MQQSNQPQQSIPVTFIPSSEEPSAHKEPSAYKEPSAHKEPSAHKKPSANGGPSAPKKPSSKTESKSGGKIQFRSQPGLFQ
RWRSATGTGLIALFFLLPFISWHGRQAIWFDLSNQQFYFFGTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCP
QTQWTFMFAWVEEKFEGSRNQRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELYPAIFSFSGGFWDT
AWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAARGESRGPRKRKAATDLGDCVDCNLCVEVCPTG
IDIRNGLQYECINCGACVDACNQTMANFGYKPDLIAFTSELGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSI
ELNVLRDRQSLYRETTGGQIENTYLLKIRNKTQQPKEYQLSVTGALTLAMSKTEVSIAPGEQVELPLTLTAMSADIQRSR
TKLTVTVSELVSESGTDGETEAVSQDSVFFAP

Sequences:

>Translated_512_residues
MQQSNQPQQSIPVTFIPSSEEPSAHKEPSAYKEPSAHKEPSAHKKPSANGGPSAPKKPSSKTESKSGGKIQFRSQPGLFQ
RWRSATGTGLIALFFLLPFISWHGRQAIWFDLSNQQFYFFGTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCP
QTQWTFMFAWVEEKFEGSRNQRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELYPAIFSFSGGFWDT
AWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAARGESRGPRKRKAATDLGDCVDCNLCVEVCPTG
IDIRNGLQYECINCGACVDACNQTMANFGYKPDLIAFTSELGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSI
ELNVLRDRQSLYRETTGGQIENTYLLKIRNKTQQPKEYQLSVTGALTLAMSKTEVSIAPGEQVELPLTLTAMSADIQRSR
TKLTVTVSELVSESGTDGETEAVSQDSVFFAP
>Mature_512_residues
MQQSNQPQQSIPVTFIPSSEEPSAHKEPSAYKEPSAHKEPSAHKKPSANGGPSAPKKPSSKTESKSGGKIQFRSQPGLFQ
RWRSATGTGLIALFFLLPFISWHGRQAIWFDLSNQQFYFFGTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCP
QTQWTFMFAWVEEKFEGSRNQRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELYPAIFSFSGGFWDT
AWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAARGESRGPRKRKAATDLGDCVDCNLCVEVCPTG
IDIRNGLQYECINCGACVDACNQTMANFGYKPDLIAFTSELGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSI
ELNVLRDRQSLYRETTGGQIENTYLLKIRNKTQQPKEYQLSVTGALTLAMSKTEVSIAPGEQVELPLTLTAMSADIQRSR
TKLTVTVSELVSESGTDGETEAVSQDSVFFAP

Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57380; Mature: 57380

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQSNQPQQSIPVTFIPSSEEPSAHKEPSAYKEPSAHKEPSAHKKPSANGGPSAPKKPSS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KTESKSGGKIQFRSQPGLFQRWRSATGTGLIALFFLLPFISWHGRQAIWFDLSNQQFYFF
CCCCCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEE
GTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCPQTQWTFMFAWVEEKFEGSRN
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC
QRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELYPAIFSFSGGFWDT
CEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAARGESRGPRKRKA
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH
ATDLGDCVDCNLCVEVCPTGIDIRNGLQYECINCGACVDACNQTMANFGYKPDLIAFTSE
HCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHH
LGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSIELNVLRDRQSLYRETTGGQI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCC
ENTYLLKIRNKTQQPKEYQLSVTGALTLAMSKTEVSIAPGEQVELPLTLTAMSADIQRSR
CCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCEEEECCCCCEEEEEEEEEHHHHHHHCC
TKLTVTVSELVSESGTDGETEAVSQDSVFFAP
EEEEEEHHHHHHCCCCCCCHHHCCCCCEEECC
>Mature Secondary Structure
MQQSNQPQQSIPVTFIPSSEEPSAHKEPSAYKEPSAHKEPSAHKKPSANGGPSAPKKPSS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KTESKSGGKIQFRSQPGLFQRWRSATGTGLIALFFLLPFISWHGRQAIWFDLSNQQFYFF
CCCCCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEE
GTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCPQTQWTFMFAWVEEKFEGSRN
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC
QRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELYPAIFSFSGGFWDT
CEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDAARGESRGPRKRKA
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH
ATDLGDCVDCNLCVEVCPTGIDIRNGLQYECINCGACVDACNQTMANFGYKPDLIAFTSE
HCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHH
LGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSIELNVLRDRQSLYRETTGGQI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCC
ENTYLLKIRNKTQQPKEYQLSVTGALTLAMSKTEVSIAPGEQVELPLTLTAMSADIQRSR
CCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCEEEECCCCCEEEEEEEEEHHHHHHHCC
TKLTVTVSELVSESGTDGETEAVSQDSVFFAP
EEEEEEHHHHHHCCCCCCCHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]