| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775862
Identifier: 119775862
GI number: 119775862
Start: 3264656
End: 3264850
Strand: Direct
Name: 119775862
Synonym: Sama_2730
Alternate gene names: NA
Gene position: 3264656-3264850 (Clockwise)
Preceding gene: 119775861
Following gene: 119775863
Centisome position: 75.81
GC content: 55.38
Gene sequence:
>195_bases ATGAAATCAGAAGTCGTTGTTCTGCTCCTTGCAACCCTGGCCCTGGTCGTGGCACTGGTAGGTCATATTGCAATCGGCTT TATGCTGAATGTCAGCGCCTTGGGTATGGTGGCAGCGCCCGTGCCCTTTGTGTTGATGTTGGTGGCCGTGATTGCGGTGA AATACGCTGCCGCCCACGATAAGCCCGCTCACTGA
Upstream 100 bases:
>100_bases ATCAAATATCTGCATCATCAAGTCTTCATACTGAAGCCATCAAAAAGCGGGCGTGAAAAAAGCCCCTTGTCCATGACAAA CCTTCAAAAGGAATTCGGTT
Downstream 100 bases:
>100_bases TCCCCGCGAAAAAACACCTCTGTGGCCCGGTTCTCCGGGCCAATAACAACTCAGGTATGTTGTTCTGGCGATGGCCGCTG CGCACAGCAAACTAACCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKSEVVVLLLATLALVVALVGHIAIGFMLNVSALGMVAAPVPFVLMLVAVIAVKYAAAHDKPAH
Sequences:
>Translated_64_residues MKSEVVVLLLATLALVVALVGHIAIGFMLNVSALGMVAAPVPFVLMLVAVIAVKYAAAHDKPAH >Mature_64_residues MKSEVVVLLLATLALVVALVGHIAIGFMLNVSALGMVAAPVPFVLMLVAVIAVKYAAAHDKPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6576; Mature: 6576
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEVVVLLLATLALVVALVGHIAIGFMLNVSALGMVAAPVPFVLMLVAVIAVKYAAAHD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPAH CCCC >Mature Secondary Structure MKSEVVVLLLATLALVVALVGHIAIGFMLNVSALGMVAAPVPFVLMLVAVIAVKYAAAHD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPAH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA