Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yiaT [C]

Identifier: 119775829

GI number: 119775829

Start: 3229016

End: 3229861

Strand: Direct

Name: yiaT [C]

Synonym: Sama_2697

Alternate gene names: 119775829

Gene position: 3229016-3229861 (Clockwise)

Preceding gene: 119775828

Following gene: 119775830

Centisome position: 74.99

GC content: 44.56

Gene sequence:

>846_bases
TTGTTTCGTTTACTATTGATATTGTTGTTATTTTCATCTGCTGTCAGTGCGAATAAAAATACACTGCCTGACTCCAATGG
CACCTTGGTTCCGGTGGGCAGCTGGTATCTGGGGCTGAGCGTGGGTGTTGGTGCGTTGAAAAATCCGTTGCGTGGCCAGG
ACAATATCCCTCTCTACGTACTGCCTGAATTTCGCTACTACGGTGAAAGATTCAGCGTCGAAAACCTGGATGTCTCCTTC
ACCTTATATGATGCCCCCGCATACAGTCTGGAGCTGGTAGGGCAGCAAAATATGGATGGCCTGCTGTTCCCGGGCGATAA
TCGACGTCTCATGGCCTCCTTTACTGGCATGATCCCCATTCGCTCCCGGGATGTGGTTGAAACTGCTGTCGAACTCCCCC
CACTTTATCCAGAACATAAATCCATGTCTTACATGGCCGGCGTGGCAGCCCGTTATTTTGGCTGGTTCGATGCACAAGTA
TTGGCCCTGACTGACGTCAGTAAAGTGCACCATGGTTATGAGATCAACCTGAGTTTAGGGAAACAATACAACTGGAAAAA
TATCAACTTTGAAGCGCAATTCGGTGCAACGTACAAAAGCAGTAAATTAACCGAATATTATTATAACGGTGAATATCAGG
AATTATTCTATCAAGTTTATAATTACCGGGCAGATTCAGCTATCAATCCTTATATTCAGTTGTCCGCAGCGTATGACCTT
GGAAATAATTATTTCGTAAGTGGCAACGTTCGAAACATTTGGCTTGATGACACCATTCATCACAGTCCAATTTTTGAAGA
CACTCACCTATTAACTTACTTCATCGGCATCAAGAAATTATTCTGA

Upstream 100 bases:

>100_bases
TTTTACATAATCACTTTGCTAGTGTGCCCTGCCTGAATGGATGCGCCGGCCAACTGAATAAATCGAAAAATAATTCGCAT
AACAATTGAGGGCGTGTTAG

Downstream 100 bases:

>100_bases
GGCAAATGATGGCAAAGCACATAATCATAATAACCGGCTTGCTGATAGTGATGTTAATGCTACCAAGAACGGCTCGCGCC
GATAACGGGATCATAGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: MltA-Interacting MipA; MltA-Interacting Protein; Outer Membrane Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Outer Membrane Protein V-Like Protein; MltA-Interacting Protein MipA Superfamily

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MFRLLLILLLFSSAVSANKNTLPDSNGTLVPVGSWYLGLSVGVGALKNPLRGQDNIPLYVLPEFRYYGERFSVENLDVSF
TLYDAPAYSLELVGQQNMDGLLFPGDNRRLMASFTGMIPIRSRDVVETAVELPPLYPEHKSMSYMAGVAARYFGWFDAQV
LALTDVSKVHHGYEINLSLGKQYNWKNINFEAQFGATYKSSKLTEYYYNGEYQELFYQVYNYRADSAINPYIQLSAAYDL
GNNYFVSGNVRNIWLDDTIHHSPIFEDTHLLTYFIGIKKLF

Sequences:

>Translated_281_residues
MFRLLLILLLFSSAVSANKNTLPDSNGTLVPVGSWYLGLSVGVGALKNPLRGQDNIPLYVLPEFRYYGERFSVENLDVSF
TLYDAPAYSLELVGQQNMDGLLFPGDNRRLMASFTGMIPIRSRDVVETAVELPPLYPEHKSMSYMAGVAARYFGWFDAQV
LALTDVSKVHHGYEINLSLGKQYNWKNINFEAQFGATYKSSKLTEYYYNGEYQELFYQVYNYRADSAINPYIQLSAAYDL
GNNYFVSGNVRNIWLDDTIHHSPIFEDTHLLTYFIGIKKLF
>Mature_281_residues
MFRLLLILLLFSSAVSANKNTLPDSNGTLVPVGSWYLGLSVGVGALKNPLRGQDNIPLYVLPEFRYYGERFSVENLDVSF
TLYDAPAYSLELVGQQNMDGLLFPGDNRRLMASFTGMIPIRSRDVVETAVELPPLYPEHKSMSYMAGVAARYFGWFDAQV
LALTDVSKVHHGYEINLSLGKQYNWKNINFEAQFGATYKSSKLTEYYYNGEYQELFYQVYNYRADSAINPYIQLSAAYDL
GNNYFVSGNVRNIWLDDTIHHSPIFEDTHLLTYFIGIKKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32031; Mature: 32031

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLLLILLLFSSAVSANKNTLPDSNGTLVPVGSWYLGLSVGVGALKNPLRGQDNIPLYV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEHHHCHHHHCCCCCCCCCCCEEE
LPEFRYYGERFSVENLDVSFTLYDAPAYSLELVGQQNMDGLLFPGDNRRLMASFTGMIPI
EECHHCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCEE
RSRDVVETAVELPPLYPEHKSMSYMAGVAARYFGWFDAQVLALTDVSKVHHGYEINLSLG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEEEEEC
KQYNWKNINFEAQFGATYKSSKLTEYYYNGEYQELFYQVYNYRADSAINPYIQLSAAYDL
CEECCCCCCEEEEECCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEC
GNNYFVSGNVRNIWLDDTIHHSPIFEDTHLLTYFIGIKKLF
CCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRLLLILLLFSSAVSANKNTLPDSNGTLVPVGSWYLGLSVGVGALKNPLRGQDNIPLYV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEHHHCHHHHCCCCCCCCCCCEEE
LPEFRYYGERFSVENLDVSFTLYDAPAYSLELVGQQNMDGLLFPGDNRRLMASFTGMIPI
EECHHCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCEE
RSRDVVETAVELPPLYPEHKSMSYMAGVAARYFGWFDAQVLALTDVSKVHHGYEINLSLG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEEEEEC
KQYNWKNINFEAQFGATYKSSKLTEYYYNGEYQELFYQVYNYRADSAINPYIQLSAAYDL
CEECCCCCCEEEEECCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEC
GNNYFVSGNVRNIWLDDTIHHSPIFEDTHLLTYFIGIKKLF
CCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA