BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is rhlE [H]

Identifier: 119775819

GI number: 119775819

Start: 3215921

End: 3217522

Strand: Direct

Name: rhlE [H]

Synonym: Sama_2687

Alternate gene names: 119775819

Gene position: 3215921-3217522 (Clockwise)

Preceding gene: 119775817

Following gene: 119775822

Centisome position: 74.68

GC content: 59.55

Gene sequence:

>1602_bases
ATGAGTTTTGCCTCACTGGGCCTGTCGGCGCCCATCCTCAAAGCCCTCGATCATAAGGGCTATAAAACCCCGTCTCCCAT
TCAGGCCCAGGCCATTCCTGTAGTGCTTGAAGGACGGGATTTGCTCGCCGCCGCTCAGACTGGTACCGGCAAAACCGCAG
GCTTTACCCTGCCCTTGCTCGAATTGTTATCCCAAACCCAAAAGGCCGGCCCCAAGCAGGTGCGCGCCCTTATCCTGACT
CCCACCCGGGAGCTTGCGGCGCAAATCGCCGATAACATCACCGCTTACAGCAAGTATCTGCCGCTGAAAAGCACCGTGGT
ATTTGGTGGGGTAGGTATTGGCCCGCAGATCACCACCCTGCGCCGTGGCATCGACATCCTGGTGGCAACGCCGGGCCGCC
TGCTGGATTTGCATCAGCAAAACGCCGTCAGCTTCCATGGTCTGGAAATTCTGGTGCTGGACGAAGCCGACCGCATGCTG
GACATGGGCTTTATCCACGACATCAAACGCATCCTGAAGCTGCTGCCTGCCAAGCGTCAAAACTTGCTGTTTTCGGCTAC
TTTCTCCCCTGAAATCCGCACCTTGGCCCATGGACTGTTGCACAATGCCGCCGAGGTATCTGTTACCCCGAGAAACAGCG
CCGCCGAAAGCGTCAAGCAGTGGATAGTGCCGGTGGACAAAAACCAAAAGCCGGCCCTGCTTGCCGAGCTGACCCGTTTT
TACCGCTGGCAGCAGGTACTGGTATTTTGCCGCACCAAGCACGGCGCCAACCGTCTGGTACGCCAGATGGATGCCGAAGG
CATCAAGGCTGCGGCCATCCATGGTAACAAGAGTCAGAACGCCCGCACCCAGGCGCTGGCCGACTTCAAACGCGGCGCCA
TTCGCATGCTGATTGCCACCGATATTGCGGCCCGCGGTATCGATATCAGTGAATTGCCCAACGTGGTCAACTTCGAGCTG
CCCCACGTACCGGAAGACTACGTACACCGCATTGGCCGTACCGGCCGCGCCGGTGCCAGCGGTGAAGCGGCCTCTTTGGT
TTGCAATGAAGAAGCCAAGCAACTCAGAGACATTGAGCGACTGATTAAGCAGTCACTGCCCCGCAAAGAGTTTGTGGGTT
TTGAACCTGTTCACGGCCTGCCCCCCAGTGAAAATCAGGGCAAGTCCAAGCCAGGTGGAAGTAAGCAAGGCGCCAAGCCC
GGCAATAAGAGCCAGGGACGAAAGCCTCAGGGCCAGAGCCGCAATGCCCAGCCAAAGCAGCGCCAGGGAAGCCGGGCACA
GGAAGAGCGCAGTCAGCAGGACAAAAATCCATCTCGCAGCGAACAGCCACGCCGTGAAAGAAGGGGTAACGACCAGGCTC
GCAGTGAAAGGCCCCACAGCGCCAGGGCTCATGGTGATAAAGCTCGTAGCGACAACGCTCGTAGCGAAAACGGCCGCAGC
GATGCCCGCACTGACAGCGCTCGAAACGACAAGCCCCGCAGCGACCGCCCGAACACTGACAGAGCTGCCAGCAACAAGCC
CCGCAGCGGCAATCGCCCCCAGGGACAGGGCCAGCAGCGGCCCCGCAGTAGTGCCAAAGGTGGCGAGCGCAATCAGGGCT
AA

Upstream 100 bases:

>100_bases
ATGGCGGCATGCCCGGTGCTTTGGTAAGCTTGCGCCCCCTGCTACGGGCGCGGCCATCAAGCCTGCCCGAACACCTTTCC
TGCAAGCAAGAGAAGACTGC

Downstream 100 bases:

>100_bases
TCTTGCCCAGACCACACAATAAAAAAACCGGCCATTGGCCGGTTTTTTTATTGTGTGCGGGGCGTGTCACCAAGGCGGCT
TGTTATTGCTGGCAATGCCT

Product: DEAD-box ATP dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLLELLSQTQKAGPKQVRALILT
PTRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTLRRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRML
DMGFIHDIKRILKLLPAKRQNLLFSATFSPEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDKNQKPALLAELTRF
YRWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRMLIATDIAARGIDISELPNVVNFEL
PHVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRDIERLIKQSLPRKEFVGFEPVHGLPPSENQGKSKPGGSKQGAKP
GNKSQGRKPQGQSRNAQPKQRQGSRAQEERSQQDKNPSRSEQPRRERRGNDQARSERPHSARAHGDKARSDNARSENGRS
DARTDSARNDKPRSDRPNTDRAASNKPRSGNRPQGQGQQRPRSSAKGGERNQG

Sequences:

>Translated_533_residues
MSFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLLELLSQTQKAGPKQVRALILT
PTRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTLRRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRML
DMGFIHDIKRILKLLPAKRQNLLFSATFSPEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDKNQKPALLAELTRF
YRWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRMLIATDIAARGIDISELPNVVNFEL
PHVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRDIERLIKQSLPRKEFVGFEPVHGLPPSENQGKSKPGGSKQGAKP
GNKSQGRKPQGQSRNAQPKQRQGSRAQEERSQQDKNPSRSEQPRRERRGNDQARSERPHSARAHGDKARSDNARSENGRS
DARTDSARNDKPRSDRPNTDRAASNKPRSGNRPQGQGQQRPRSSAKGGERNQG
>Mature_532_residues
SFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLLELLSQTQKAGPKQVRALILTP
TRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTLRRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRMLD
MGFIHDIKRILKLLPAKRQNLLFSATFSPEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDKNQKPALLAELTRFY
RWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRMLIATDIAARGIDISELPNVVNFELP
HVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRDIERLIKQSLPRKEFVGFEPVHGLPPSENQGKSKPGGSKQGAKPG
NKSQGRKPQGQSRNAQPKQRQGSRAQEERSQQDKNPSRSEQPRRERRGNDQARSERPHSARAHGDKARSDNARSENGRSD
ARTDSARNDKPRSDRPNTDRAASNKPRSGNRPQGQGQQRPRSSAKGGERNQG

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=40.771349862259, Blast_Score=275, Evalue=1e-73,
Organism=Homo sapiens, GI301171467, Length=391, Percent_Identity=40.4092071611253, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI87196351, Length=391, Percent_Identity=40.4092071611253, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI301171475, Length=391, Percent_Identity=40.4092071611253, Blast_Score=266, Evalue=4e-71,
Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=37.2282608695652, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=38.7096774193548, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI169881239, Length=391, Percent_Identity=40.153452685422, Blast_Score=260, Evalue=3e-69,
Organism=Homo sapiens, GI13514809, Length=391, Percent_Identity=40.153452685422, Blast_Score=260, Evalue=3e-69,
Organism=Homo sapiens, GI41327771, Length=416, Percent_Identity=35.5769230769231, Blast_Score=255, Evalue=9e-68,
Organism=Homo sapiens, GI4758138, Length=373, Percent_Identity=36.4611260053619, Blast_Score=252, Evalue=7e-67,
Organism=Homo sapiens, GI21071032, Length=382, Percent_Identity=37.696335078534, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.375350140056, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.375350140056, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=38.0821917808219, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI164419743, Length=385, Percent_Identity=38.1818181818182, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI51094101, Length=385, Percent_Identity=38.1818181818182, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.375350140056, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=36.7292225201072, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=36.7292225201072, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI55749865, Length=374, Percent_Identity=37.7005347593583, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI222352149, Length=365, Percent_Identity=39.4520547945205, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI31542656, Length=383, Percent_Identity=39.1644908616188, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=34.7222222222222, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=37.0879120879121, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=37.0879120879121, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI188035877, Length=367, Percent_Identity=37.6021798365123, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=35.054347826087, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=33.2402234636872, Blast_Score=219, Evalue=7e-57,
Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=9e-55,
Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=35.752688172043, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI38327634, Length=382, Percent_Identity=36.6492146596859, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=35.3403141361257, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=35.3403141361257, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI13129006, Length=401, Percent_Identity=33.4164588528678, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=34.4827586206897, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI21040371, Length=367, Percent_Identity=32.6975476839237, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI4503529, Length=367, Percent_Identity=33.5149863760218, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI4758112, Length=365, Percent_Identity=32.0547945205479, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI18375623, Length=365, Percent_Identity=32.0547945205479, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=33.2425068119891, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=31.9711538461538, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI256223453, Length=380, Percent_Identity=35.2631578947368, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=31.1557788944724, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI6005743, Length=361, Percent_Identity=32.6869806094183, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI8922886, Length=361, Percent_Identity=31.5789473684211, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI4826686, Length=350, Percent_Identity=32.5714285714286, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=32.9446064139942, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI154759257, Length=403, Percent_Identity=30.7692307692308, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI164419732, Length=355, Percent_Identity=31.2676056338028, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=32.6086956521739, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI9966805, Length=342, Percent_Identity=30.1169590643275, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI20336298, Length=358, Percent_Identity=31.2849162011173, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=31.4285714285714, Blast_Score=133, Evalue=5e-31,
Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=66.6666666666667, Blast_Score=505, Evalue=1e-144,
Organism=Escherichia coli, GI87082221, Length=398, Percent_Identity=42.4623115577889, Blast_Score=278, Evalue=7e-76,
Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=40.3743315508021, Blast_Score=271, Evalue=8e-74,
Organism=Escherichia coli, GI1787605, Length=403, Percent_Identity=38.4615384615385, Blast_Score=241, Evalue=6e-65,
Organism=Escherichia coli, GI1788930, Length=393, Percent_Identity=38.4223918575064, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI48994977, Length=371, Percent_Identity=25.6064690026954, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=39.0449438202247, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI17510559, Length=406, Percent_Identity=35.9605911330049, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=38.3333333333333, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17555296, Length=360, Percent_Identity=38.3333333333333, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=383, Percent_Identity=38.3812010443864, Blast_Score=248, Evalue=5e-66,
Organism=Caenorhabditis elegans, GI17510309, Length=383, Percent_Identity=38.3812010443864, Blast_Score=248, Evalue=6e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=383, Percent_Identity=38.3812010443864, Blast_Score=248, Evalue=7e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=424, Percent_Identity=33.7264150943396, Blast_Score=248, Evalue=8e-66,
Organism=Caenorhabditis elegans, GI71995718, Length=387, Percent_Identity=38.2428940568475, Blast_Score=244, Evalue=8e-65,
Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=35, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=34.7222222222222, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=34.4444444444444, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17507945, Length=389, Percent_Identity=37.5321336760925, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=35.5614973262032, Blast_Score=228, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=34.2618384401114, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=33.5195530726257, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=35.6200527704486, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=33.5195530726257, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=431, Percent_Identity=33.1786542923434, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=34.3832020997375, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=35.6200527704486, Blast_Score=217, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=395, Percent_Identity=32.6582278481013, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=34.9593495934959, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=34.5744680851064, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17505370, Length=381, Percent_Identity=35.6955380577428, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=33.0708661417323, Blast_Score=192, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=31.7808219178082, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI193208216, Length=403, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI193206561, Length=356, Percent_Identity=32.3033707865169, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17556951, Length=353, Percent_Identity=33.4277620396601, Blast_Score=177, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=31.4447592067989, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=30.749354005168, Blast_Score=161, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=30.749354005168, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=30.749354005168, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=31.9371727748691, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=25.5369928400955, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=31.9034852546917, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=26.4044943820225, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.9156626506024, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=33.6538461538462, Blast_Score=119, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=463, Percent_Identity=25.2699784017279, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=41.2371134020619, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324778, Length=381, Percent_Identity=38.8451443569554, Blast_Score=268, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6325138, Length=383, Percent_Identity=38.9033942558747, Blast_Score=265, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=41.7827298050139, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6323021, Length=368, Percent_Identity=39.945652173913, Blast_Score=250, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=38.1081081081081, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=378, Percent_Identity=37.037037037037, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=33.2417582417582, Blast_Score=231, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=34.6260387811634, Blast_Score=226, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6320173, Length=417, Percent_Identity=31.1750599520384, Blast_Score=219, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6323947, Length=351, Percent_Identity=35.6125356125356, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=35.7340720221607, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6319714, Length=395, Percent_Identity=30.8860759493671, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=33.7801608579088, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=33.8624338624339, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=31.4917127071823, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=34.2618384401114, Blast_Score=192, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=360, Percent_Identity=34.1666666666667, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6322323, Length=360, Percent_Identity=34.1666666666667, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=31.6216216216216, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=29.6385542168675, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.4939172749392, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=395, Percent_Identity=28.6075949367089, Blast_Score=156, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=368, Percent_Identity=30.1630434782609, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6324366, Length=368, Percent_Identity=25.8152173913043, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6322876, Length=220, Percent_Identity=32.7272727272727, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321374, Length=210, Percent_Identity=28.0952380952381, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=39.0243902439024, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=41.3793103448276, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=39.344262295082, Blast_Score=268, Evalue=1e-71,
Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=39.9449035812672, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24584994, Length=427, Percent_Identity=34.8946135831382, Blast_Score=255, Evalue=4e-68,
Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=36.4611260053619, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24585582, Length=368, Percent_Identity=37.5, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=35.9580052493438, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24644479, Length=373, Percent_Identity=36.4611260053619, Blast_Score=252, Evalue=5e-67,
Organism=Drosophila melanogaster, GI281361218, Length=373, Percent_Identity=36.4611260053619, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24644481, Length=373, Percent_Identity=36.4611260053619, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24644483, Length=373, Percent_Identity=36.4611260053619, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24644487, Length=373, Percent_Identity=36.4611260053619, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI45551833, Length=373, Percent_Identity=36.4611260053619, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24644485, Length=373, Percent_Identity=36.4611260053619, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=37.0843989769821, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI28575014, Length=362, Percent_Identity=35.3591160220994, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=37.2881355932203, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI17977678, Length=381, Percent_Identity=35.4330708661417, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=34.7222222222222, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24583279, Length=358, Percent_Identity=33.5195530726257, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24583281, Length=358, Percent_Identity=33.5195530726257, Blast_Score=219, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=33.6065573770492, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=33.6065573770492, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=33.6065573770492, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=33.6065573770492, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI17136814, Length=351, Percent_Identity=37.8917378917379, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=36.5079365079365, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI28571808, Length=381, Percent_Identity=33.8582677165354, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571809, Length=381, Percent_Identity=33.8582677165354, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24666101, Length=378, Percent_Identity=34.1269841269841, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581954, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581952, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581956, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=34.3163538873995, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI20130173, Length=469, Percent_Identity=29.2110874200426, Blast_Score=183, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=31.8181818181818, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=27.2965879265092, Blast_Score=165, Evalue=8e-41,
Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=28.5359801488834, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=29.1866028708134, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=29.8192771084337, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19920478, Length=349, Percent_Identity=30.945558739255, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=28.0453257790368, Blast_Score=135, Evalue=1e-31,
Organism=Drosophila melanogaster, GI28571338, Length=217, Percent_Identity=35.9447004608295, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859659, Length=217, Percent_Identity=35.9447004608295, Blast_Score=121, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 58339; Mature: 58208

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLL
CCHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHH
ELLSQTQKAGPKQVRALILTPTRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTL
HHHHHHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHH
RRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRMLDMGFIHDIKRILKLLPAKRQ
HCCCEEEEECCCHHHHHHHHCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHH
NLLFSATFSPEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDKNQKPALLAELTRF
CEEEEEECCCHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
YRWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRMLIAT
HHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEHHHHH
DIAARGIDISELPNVVNFELPHVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRDIER
HHHHCCCCHHHCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHEECHHHHHHHHHHH
LIKQSLPRKEFVGFEPVHGLPPSENQGKSKPGGSKQGAKPGNKSQGRKPQGQSRNAQPKQ
HHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RQGSRAQEERSQQDKNPSRSEQPRRERRGNDQARSERPHSARAHGDKARSDNARSENGRS
HCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHCCCCCHHHCCCHHCCCCCCCCCCCC
DARTDSARNDKPRSDRPNTDRAASNKPRSGNRPQGQGQQRPRSSAKGGERNQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLL
CHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHH
ELLSQTQKAGPKQVRALILTPTRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTL
HHHHHHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHH
RRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRMLDMGFIHDIKRILKLLPAKRQ
HCCCEEEEECCCHHHHHHHHCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHH
NLLFSATFSPEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDKNQKPALLAELTRF
CEEEEEECCCHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
YRWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRMLIAT
HHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEHHHHH
DIAARGIDISELPNVVNFELPHVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRDIER
HHHHCCCCHHHCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHEECHHHHHHHHHHH
LIKQSLPRKEFVGFEPVHGLPPSENQGKSKPGGSKQGAKPGNKSQGRKPQGQSRNAQPKQ
HHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RQGSRAQEERSQQDKNPSRSEQPRRERRGNDQARSERPHSARAHGDKARSDNARSENGRS
HCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHCCCCCHHHCCCHHCCCCCCCCCCCC
DARTDSARNDKPRSDRPNTDRAASNKPRSGNRPQGQGQQRPRSSAKGGERNQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]