| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775655
Identifier: 119775655
GI number: 119775655
Start: 3032704
End: 3032955
Strand: Direct
Name: 119775655
Synonym: Sama_2523
Alternate gene names: NA
Gene position: 3032704-3032955 (Clockwise)
Preceding gene: 119775654
Following gene: 119775656
Centisome position: 70.43
GC content: 50.79
Gene sequence:
>252_bases ATGCGTTTACTCCCTGTGACACTTGCCACAGCCCTTACCCTGCTGCTAACCGCCTGCAGCGCCAATCAGGTGACCCAATC TGGATGCGCCTTTGTGACTGGCGTTTATGAAAACGACAACCAAAATCGCAGCACCCCGGATAACAGAGAAAGCACGGCCA AAGAAAATGCTGCGGTCGGCATGATAAATGCCCTATTTGCCGGAATAGCAGGCCTTTTCAAAGACGAGGATAAAGAGGAA AACTGCCTCTAA
Upstream 100 bases:
>100_bases TCAAGGAACATGACCGACTGGGGCTTCTTTGCTATAACCATGGAACCATCAGTGACAGACTCAGTCATAAATCTATCGAC AAAAGAATCAAGGAAGACTC
Downstream 100 bases:
>100_bases CACACGGAATCACAGACAAGGAGAGCAACAGATGAATTCCATTCTTCTCGGTGGCAATGGCAACACCCAGGTTACTCTCA ATGCAGCCATGGCAAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE NCL
Sequences:
>Translated_83_residues MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE NCL >Mature_83_residues MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE NCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8852; Mature: 8852
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH MINALFAGIAGLFKDEDKEENCL HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH MINALFAGIAGLFKDEDKEENCL HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA