Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775655

Identifier: 119775655

GI number: 119775655

Start: 3032704

End: 3032955

Strand: Direct

Name: 119775655

Synonym: Sama_2523

Alternate gene names: NA

Gene position: 3032704-3032955 (Clockwise)

Preceding gene: 119775654

Following gene: 119775656

Centisome position: 70.43

GC content: 50.79

Gene sequence:

>252_bases
ATGCGTTTACTCCCTGTGACACTTGCCACAGCCCTTACCCTGCTGCTAACCGCCTGCAGCGCCAATCAGGTGACCCAATC
TGGATGCGCCTTTGTGACTGGCGTTTATGAAAACGACAACCAAAATCGCAGCACCCCGGATAACAGAGAAAGCACGGCCA
AAGAAAATGCTGCGGTCGGCATGATAAATGCCCTATTTGCCGGAATAGCAGGCCTTTTCAAAGACGAGGATAAAGAGGAA
AACTGCCTCTAA

Upstream 100 bases:

>100_bases
TCAAGGAACATGACCGACTGGGGCTTCTTTGCTATAACCATGGAACCATCAGTGACAGACTCAGTCATAAATCTATCGAC
AAAAGAATCAAGGAAGACTC

Downstream 100 bases:

>100_bases
CACACGGAATCACAGACAAGGAGAGCAACAGATGAATTCCATTCTTCTCGGTGGCAATGGCAACACCCAGGTTACTCTCA
ATGCAGCCATGGCAAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE
NCL

Sequences:

>Translated_83_residues
MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE
NCL
>Mature_83_residues
MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVGMINALFAGIAGLFKDEDKEE
NCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8852; Mature: 8852

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
MINALFAGIAGLFKDEDKEENCL
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLLPVTLATALTLLLTACSANQVTQSGCAFVTGVYENDNQNRSTPDNRESTAKENAAVG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
MINALFAGIAGLFKDEDKEENCL
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA