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The map label for this gene is 119775626

Identifier: 119775626

GI number: 119775626

Start: 2995573

End: 2996217

Strand: Reverse

Name: 119775626

Synonym: Sama_2494

Alternate gene names: NA

Gene position: 2996217-2995573 (Counterclockwise)

Preceding gene: 119775628

Following gene: 119775625

Centisome position: 69.58

GC content: 51.47

Gene sequence:

>645_bases
ATGAATGGCAAAGTATATGTTTGGGACTGGGTGGTCCGGGGTTTTCACTGGCTCTTGGTTGCCGCCTTTCTTACCAGTTA
CCTCAGTGGGGATGAATGGGAAAGCCTGCATGTGTACAGCGGCTACCTGATAGTGACGCTGCTGCTGGTGCGTATTCTGT
GGGGATTTATCGGCAGCAAGCATGCCAGATTCAGCGACTTTGTGCGCTCACCGGCTGCTGCCATTGCGTACCTTAAGGGA
TTGGCTGCCGGAAAGATAACCCATTACCGTGGCCATAATCCCGCTGGTGGACTGATGGTGATAGCACTTTTATTAAGCAT
TGCCATGACAGGATTTTCCGGGCTTAAAACCTACGGTTTTGAAGGCAAGGGGCCGCTTGCCGTGGTTAGTCAGACTCAGG
CTGGTTCTCTGTCAGCCTCGGCGGTGGAGACTGGCTTCGACAAAGATGGCGACCATGACAAAGAGCATGGTGACAAGCAT
CAAAAAGAAAACCCGGATGAAGAATTCTGGGAAGAAATTCATGAGTTTTTTGCCAACTTTACCGTCTTGCTGGTACTGCT
GCACATAGCCGGTGTGATCGTATCCTCCCGCGTGCACAGGGAAGATCTGGTCGGGGCCATGATCACAGGTTACAAGGAAG
AGTAA

Upstream 100 bases:

>100_bases
TAACACCATGTGTTTCAGGCGTTTGCCCACTTCTTCATAGCCTTGCACGCCCCATAATAGGCCTAAACCGGCGTAAGGCC
AATCGATGGGGATGAAAGAG

Downstream 100 bases:

>100_bases
GAGCGAATCGGGATTCTTGGTAAAGAAAGTGATCTATGGAAGGTTTTGGCTTGCCAGTTTTTGACCCGGGTATACCTATC
GATTAGCTTTGAGGCAGGCG

Product: cytochrome b561

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Cytochrome B/B6 Domain; B-Type Cytochrome; Dihem Cytochrome C; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNGKVYVWDWVVRGFHWLLVAAFLTSYLSGDEWESLHVYSGYLIVTLLLVRILWGFIGSKHARFSDFVRSPAAAIAYLKG
LAAGKITHYRGHNPAGGLMVIALLLSIAMTGFSGLKTYGFEGKGPLAVVSQTQAGSLSASAVETGFDKDGDHDKEHGDKH
QKENPDEEFWEEIHEFFANFTVLLVLLHIAGVIVSSRVHREDLVGAMITGYKEE

Sequences:

>Translated_214_residues
MNGKVYVWDWVVRGFHWLLVAAFLTSYLSGDEWESLHVYSGYLIVTLLLVRILWGFIGSKHARFSDFVRSPAAAIAYLKG
LAAGKITHYRGHNPAGGLMVIALLLSIAMTGFSGLKTYGFEGKGPLAVVSQTQAGSLSASAVETGFDKDGDHDKEHGDKH
QKENPDEEFWEEIHEFFANFTVLLVLLHIAGVIVSSRVHREDLVGAMITGYKEE
>Mature_214_residues
MNGKVYVWDWVVRGFHWLLVAAFLTSYLSGDEWESLHVYSGYLIVTLLLVRILWGFIGSKHARFSDFVRSPAAAIAYLKG
LAAGKITHYRGHNPAGGLMVIALLLSIAMTGFSGLKTYGFEGKGPLAVVSQTQAGSLSASAVETGFDKDGDHDKEHGDKH
QKENPDEEFWEEIHEFFANFTVLLVLLHIAGVIVSSRVHREDLVGAMITGYKEE

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23654; Mature: 23654

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGKVYVWDWVVRGFHWLLVAAFLTSYLSGDEWESLHVYSGYLIVTLLLVRILWGFIGSK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
HARFSDFVRSPAAAIAYLKGLAAGKITHYRGHNPAGGLMVIALLLSIAMTGFSGLKTYGF
CHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCC
EGKGPLAVVSQTQAGSLSASAVETGFDKDGDHDKEHGDKHQKENPDEEFWEEIHEFFANF
CCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
TVLLVLLHIAGVIVSSRVHREDLVGAMITGYKEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNGKVYVWDWVVRGFHWLLVAAFLTSYLSGDEWESLHVYSGYLIVTLLLVRILWGFIGSK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
HARFSDFVRSPAAAIAYLKGLAAGKITHYRGHNPAGGLMVIALLLSIAMTGFSGLKTYGF
CHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCC
EGKGPLAVVSQTQAGSLSASAVETGFDKDGDHDKEHGDKHQKENPDEEFWEEIHEFFANF
CCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
TVLLVLLHIAGVIVSSRVHREDLVGAMITGYKEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA