Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yggX [C]

Identifier: 119775624

GI number: 119775624

Start: 2993425

End: 2993700

Strand: Direct

Name: yggX [C]

Synonym: Sama_2491

Alternate gene names: 119775624

Gene position: 2993425-2993700 (Clockwise)

Preceding gene: 119775623

Following gene: 119775627

Centisome position: 69.52

GC content: 48.55

Gene sequence:

>276_bases
ATGGCCCGTACCGTTCAGTGTGTGTATTTGGGTAAAGAAGCCGAAGGTCTGGATTTCCAGCTCTATCCCGGCGAGCTCGG
CAAGCGCATTTTCGACACCATCAGCAAAGAAGCCTGGGGCGAGTGGCAGAAAAAGCAGACCATGCTTATCAATGAGAAAA
AATTGAACATGATGAACATGGACCATCGCAAACTGCTCGAAGAGCAAATGCAGCTATTCCTGTTCGAAGGCAAGGATGTG
CAGATTGAAGGTTACGTTCCACCGAAACCTGAATGA

Upstream 100 bases:

>100_bases
TCTTGGGCTTGCCGCCGCCACCGAGCGAATTCTGGCAAGCCTTGTAAGCGAACTTAAGCAAGAATCCGGCGGCAGCGCTG
CCGCCCACAAGGAGTAAAAC

Downstream 100 bases:

>100_bases
TGCAAGGATAAATCGCTAACATCCTTCATGATGCCATCACCGCTATGGTGTCACTCGAATAAGGCCCCTCGCGGGCCTTT
TAGTTATCTGCGATAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MARTVQCVYLGKEAEGLDFQLYPGELGKRIFDTISKEAWGEWQKKQTMLINEKKLNMMNMDHRKLLEEQMQLFLFEGKDV
QIEGYVPPKPE

Sequences:

>Translated_91_residues
MARTVQCVYLGKEAEGLDFQLYPGELGKRIFDTISKEAWGEWQKKQTMLINEKKLNMMNMDHRKLLEEQMQLFLFEGKDV
QIEGYVPPKPE
>Mature_90_residues
ARTVQCVYLGKEAEGLDFQLYPGELGKRIFDTISKEAWGEWQKKQTMLINEKKLNMMNMDHRKLLEEQMQLFLFEGKDVQ
IEGYVPPKPE

Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes

COG id: COG2924

COG function: function code CO; Fe-S cluster protector protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fe(2+)-trafficking protein family

Homologues:

Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=73.5632183908046, Blast_Score=139, Evalue=3e-35,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): FETP_SHEAM (A1S8I8)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928364.1
- ProteinModelPortal:   A1S8I8
- SMR:   A1S8I8
- STRING:   A1S8I8
- GeneID:   4604739
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2491
- NMPDR:   fig|326297.7.peg.2332
- eggNOG:   COG2924
- HOGENOM:   HBG289800
- OMA:   SKQTMLI
- PhylomeDB:   A1S8I8
- ProtClustDB:   PRK05408
- HAMAP:   MF_00686
- InterPro:   IPR007457
- PIRSF:   PIRSF029827
- ProDom:   PD029191

Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX

EC number: NA

Molecular weight: Translated: 10739; Mature: 10607

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTVQCVYLGKEAEGLDFQLYPGELGKRIFDTISKEAWGEWQKKQTMLINEKKLNMMNM
CCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCC
DHRKLLEEQMQLFLFEGKDVQIEGYVPPKPE
CHHHHHHHHHHEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure 
ARTVQCVYLGKEAEGLDFQLYPGELGKRIFDTISKEAWGEWQKKQTMLINEKKLNMMNM
CCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCC
DHRKLLEEQMQLFLFEGKDVQIEGYVPPKPE
CHHHHHHHHHHEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA