Click here to switch to the map view.

The map label for this gene is yciH [H]

Identifier: 119775604

GI number: 119775604

Start: 2975939

End: 2976268

Strand: Direct

Name: yciH [H]

Synonym: Sama_2471

Alternate gene names: 119775604

Gene position: 2975939-2976268 (Clockwise)

Preceding gene: 119775603

Following gene: 119775605

Centisome position: 69.11

GC content: 52.12

Gene sequence:

>330_bases
ATGAGAATCGATCCGAACGTATTACTGGTGTACAGCACAGATAAGGGCAGAATCGATGAGCCCACACCGGAAGTTGAGGT
ACCCAAAGGCGACGGCGTGGTTCGCATCCACAGAGACAGTAAAGGCCGCAAGGGAAAGGGTGTCAGCGTGATAAGCGGCC
TGGGACTCGACCAGGGAGCACTCAAGGAGCTGGCTCAAAAGCTAAAGAAGCAGTGTGGCTGTGGTGGAACAGTAAAGGAC
TTCGACATTGAAGTCCAAACCGATAACCGGGAACTGCTAAAGGGCCTGCTTGAAAAACAAGGATTTACCGTAAAGCTTGC
GGGAGGGTAA

Upstream 100 bases:

>100_bases
AAAAACACCACCTTAAGGGTGGTGTTTTGTTTTTTAACGCCACAACATATATTTGCCGACTCTGGTAAACTGACAAAAAG
AGACTGCGGCAGAGTGAACT

Downstream 100 bases:

>100_bases
TCATGTCGATGGACAGCCTTAAAAATCATTTTCTGATTGCCATGCCAAGCCTTAATGACGGCTTCTTTGACAAGACGGTT
GTTTACCTCTGTGAACATGA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MRIDPNVLLVYSTDKGRIDEPTPEVEVPKGDGVVRIHRDSKGRKGKGVSVISGLGLDQGALKELAQKLKKQCGCGGTVKD
FDIEVQTDNRELLKGLLEKQGFTVKLAGG

Sequences:

>Translated_109_residues
MRIDPNVLLVYSTDKGRIDEPTPEVEVPKGDGVVRIHRDSKGRKGKGVSVISGLGLDQGALKELAQKLKKQCGCGGTVKD
FDIEVQTDNRELLKGLLEKQGFTVKLAGG
>Mature_109_residues
MRIDPNVLLVYSTDKGRIDEPTPEVEVPKGDGVVRIHRDSKGRKGKGVSVISGLGLDQGALKELAQKLKKQCGCGGTVKD
FDIEVQTDNRELLKGLLEKQGFTVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=106, Percent_Identity=62.2641509433962, Blast_Score=125, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11745; Mature: 11745

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDPNVLLVYSTDKGRIDEPTPEVEVPKGDGVVRIHRDSKGRKGKGVSVISGLGLDQGA
CCCCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHH
LKELAQKLKKQCGCGGTVKDFDIEVQTDNRELLKGLLEKQGFTVKLAGG
HHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MRIDPNVLLVYSTDKGRIDEPTPEVEVPKGDGVVRIHRDSKGRKGKGVSVISGLGLDQGA
CCCCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHH
LKELAQKLKKQCGCGGTVKDFDIEVQTDNRELLKGLLEKQGFTVKLAGG
HHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]