Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775518

Identifier: 119775518

GI number: 119775518

Start: 2865014

End: 2865805

Strand: Reverse

Name: 119775518

Synonym: Sama_2384

Alternate gene names: NA

Gene position: 2865805-2865014 (Counterclockwise)

Preceding gene: 119775520

Following gene: 119775517

Centisome position: 66.55

GC content: 53.28

Gene sequence:

>792_bases
TTGGGTAGTTTGGTCTGTGTGGGCACAGGGATAGGGTTGGCTGGACAGATCAGCGTCCGGGCCAAGAGTCACATCATCCA
CGCTGAACTGGTATTCAGTTTGCTGCCCGATGGTTTTGCCCAGCATTATCTTGAAGAACTTAATCCCAATGTGGTTAACC
TCCAGCAATTTTATGCTCAAGGTGATGAGGTAAAGAGCCGGCGATTGACTTACGAGCAAATGACAGAGTCAATGTTGGCA
GCGGTGAGAACGGGTAAAAAAGTGGTAGGGGCGTTTTATGGGCATCCTGGGGTGTTTGCCTGTGTGCCACATATGGCCAT
AAGCCGTGCCCGCAGTGAGGGGTTTGATGCCTGGATGGAGCCCGGTATTTCGGCTGAAGATTGCCTCTGGGCCGATCTGG
GTATCGACCCGGGGCAAAGTGGTCACCAAAGTATGGAAGCCAGCCAGTTTTTGTTTTACCAACATGTGCCTAATCCATGT
TGCCACTTATTGCTCTGGCAAATAGCCCTTGCCGGAGAACACACGCTGACCAAGTTCCATACCAGTTCAGACAGATTGCA
GGTGTTGGTGGAGCATTTAATGCAGTGGTATCCGCCGGAGCATGAGGTTGTGCTGTATGAGGCTGCATTTTTGCCGGTGC
ATGAACCCAGTGTGCACCGGGTAAAGCTTCACGAGTTACCCGGCGCTCCCATGGGCCCTGCGACAACCCTGCTGGTGCCG
CCTGCCAGGCGGCTTGAATACAATCTTGAGGTATTGGCCCGACTTGGGCTGAGCCCTGAGGATCTTGCCTGA

Upstream 100 bases:

>100_bases
TTAGCTCGATGGTTTAGGGTGAAAAAGAGCGCTCTGTGTATTGCAATACGCCCGGAAAGTTATAAAAATGTGATTTTTGA
GCAGGAACTCGGAGTAGGTC

Downstream 100 bases:

>100_bases
CAGGGTAAGTGATTGTTCGACAAATCCACGACAGCGGAAAATAAGGAGAACCAGGTGTCAAAACTGACAGATTTTTTAAA
GCAGCTTGGGGAAGATGCTG

Product: methylase

Products: NA

Alternate protein names: Methylase; Tetrapyrrole Methylase; Uroporphyrinogen III Methylase; Tetrapyrrole Methylases Domain Protein

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGSLVCVGTGIGLAGQISVRAKSHIIHAELVFSLLPDGFAQHYLEELNPNVVNLQQFYAQGDEVKSRRLTYEQMTESMLA
AVRTGKKVVGAFYGHPGVFACVPHMAISRARSEGFDAWMEPGISAEDCLWADLGIDPGQSGHQSMEASQFLFYQHVPNPC
CHLLLWQIALAGEHTLTKFHTSSDRLQVLVEHLMQWYPPEHEVVLYEAAFLPVHEPSVHRVKLHELPGAPMGPATTLLVP
PARRLEYNLEVLARLGLSPEDLA

Sequences:

>Translated_263_residues
MGSLVCVGTGIGLAGQISVRAKSHIIHAELVFSLLPDGFAQHYLEELNPNVVNLQQFYAQGDEVKSRRLTYEQMTESMLA
AVRTGKKVVGAFYGHPGVFACVPHMAISRARSEGFDAWMEPGISAEDCLWADLGIDPGQSGHQSMEASQFLFYQHVPNPC
CHLLLWQIALAGEHTLTKFHTSSDRLQVLVEHLMQWYPPEHEVVLYEAAFLPVHEPSVHRVKLHELPGAPMGPATTLLVP
PARRLEYNLEVLARLGLSPEDLA
>Mature_262_residues
GSLVCVGTGIGLAGQISVRAKSHIIHAELVFSLLPDGFAQHYLEELNPNVVNLQQFYAQGDEVKSRRLTYEQMTESMLAA
VRTGKKVVGAFYGHPGVFACVPHMAISRARSEGFDAWMEPGISAEDCLWADLGIDPGQSGHQSMEASQFLFYQHVPNPCC
HLLLWQIALAGEHTLTKFHTSSDRLQVLVEHLMQWYPPEHEVVLYEAAFLPVHEPSVHRVKLHELPGAPMGPATTLLVPP
ARRLEYNLEVLARLGLSPEDLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29108; Mature: 28977

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLVCVGTGIGLAGQISVRAKSHIIHAELVFSLLPDGFAQHYLEELNPNVVNLQQFYAQ
CCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHCC
GDEVKSRRLTYEQMTESMLAAVRTGKKVVGAFYGHPGVFACVPHMAISRARSEGFDAWME
CHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHC
PGISAEDCLWADLGIDPGQSGHQSMEASQFLFYQHVPNPCCHLLLWQIALAGEHTLTKFH
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEC
TSSDRLQVLVEHLMQWYPPEHEVVLYEAAFLPVHEPSVHRVKLHELPGAPMGPATTLLVP
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEC
PARRLEYNLEVLARLGLSPEDLA
CHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure 
GSLVCVGTGIGLAGQISVRAKSHIIHAELVFSLLPDGFAQHYLEELNPNVVNLQQFYAQ
CCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHCC
GDEVKSRRLTYEQMTESMLAAVRTGKKVVGAFYGHPGVFACVPHMAISRARSEGFDAWME
CHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHC
PGISAEDCLWADLGIDPGQSGHQSMEASQFLFYQHVPNPCCHLLLWQIALAGEHTLTKFH
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEC
TSSDRLQVLVEHLMQWYPPEHEVVLYEAAFLPVHEPSVHRVKLHELPGAPMGPATTLLVP
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEC
PARRLEYNLEVLARLGLSPEDLA
CHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA