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The map label for this gene is flgC [H]

Identifier: 119775452

GI number: 119775452

Start: 2783044

End: 2783457

Strand: Reverse

Name: flgC [H]

Synonym: Sama_2317

Alternate gene names: 119775452

Gene position: 2783457-2783044 (Counterclockwise)

Preceding gene: 119775453

Following gene: 119775451

Centisome position: 64.64

GC content: 50.24

Gene sequence:

>414_bases
ATGAGCTTGTTTAATATCTTCAATGTGTCTGGCTCCGGGATGAGTGCGCAATCGGTTCGCCTCAATACCACCGCCAGCAA
CATTGCCAACGCAGATTCAGTGTCCAGCAGCGTCGATAAAACCTACCGGGCGCGTCATCCTGTGTTTGAGGCTGAACTTG
CCAAAGCCAGCCAGCAGCAATCTGCCCGTGGGGTGAATGTCAAAGGCATAGTCGAAAGTGATAAGCCGCTGCAAAAAGAA
TACAACCCGGACCATCCCATGGCGGATGCCGATGGCTTTATTTACAAACCCAATGTGAACGTGATGGAAGAAATGGCCGA
CATGATTTCCGCTTCGCGTTCGTATCAAATGAATGTCCAGGTGGCCGATACCGCCAAGAGTATGCTGATGCAGACTTTGA
GAATGGGCAAATAA

Upstream 100 bases:

>100_bases
AGTCTGCCTTTATGCAGAATGCGCTCGAATATCAGATGTCGCTGGGCTTTCTGGAAGGCAAGTTCAACGGTATGAAAAAG
GCTATTAAAGGAGACTGACA

Downstream 100 bases:

>100_bases
CGGATGTGGCGCTAAGGAGGTAAGCCGTGAGTTTTCTTAACTCTATCAGTCAGGCATCGGCGGCCCAGTCAACCCAGAGC
ACGGGAAATCCCTTTCTGGA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQSARGVNVKGIVESDKPLQKE
YNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVADTAKSMLMQTLRMGK

Sequences:

>Translated_137_residues
MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQSARGVNVKGIVESDKPLQKE
YNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVADTAKSMLMQTLRMGK
>Mature_136_residues
SLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQSARGVNVKGIVESDKPLQKEY
NPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVADTAKSMLMQTLRMGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=137, Percent_Identity=46.7153284671533, Blast_Score=130, Evalue=2e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14984; Mature: 14853

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQ
CCCEEEEECCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SARGVNVKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ
HCCCCCEEEEECCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEE
VADTAKSMLMQTLRMGK
EHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQ
CCEEEEECCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SARGVNVKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ
HCCCCCEEEEECCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEE
VADTAKSMLMQTLRMGK
EHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]