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The map label for this gene is flgF [H]

Identifier: 119775449

GI number: 119775449

Start: 2779984

End: 2780727

Strand: Reverse

Name: flgF [H]

Synonym: Sama_2314

Alternate gene names: 119775449

Gene position: 2780727-2779984 (Counterclockwise)

Preceding gene: 119775450

Following gene: 119775448

Centisome position: 64.58

GC content: 55.11

Gene sequence:

>744_bases
GTGGACAAATTTCTCTATATCGCCATGAGTGGTGCCAAGCAGAATCTCAATTCGCTTTCCATTCGGGCCAACAACCTGGC
CAACGCCAACACCGATGGCTTCAAGGCCGATTTGGAGCAATCCCGCTCCATGCAAGCCTTTGGAGAGGGATTGCCCACGC
GGGTATTCGCCATGACCGAAAATCCCCAGGCCAGTTTCCGTCACGGTCCCATTAACAGCACTGCTCGGGATCTGGATGTG
GCCGTGAAAGGTGATGGCTGGATTGCGGTGGAAGATGCCGATGGCAACGAGGCCTATACCCGTGCCGGTAGCCTGAAATT
TGACGAAACCGGTTTGCTGACCAATTCACAGGGGCGTCCTGTGATGGGCGATGCTGGCCCAATCGTTCTGCCGCTGCCCA
TCGACAAGGTGGAAATTGCCCAGGACGGCACTATCACGGTACGGCCTCAGGGGGCTACTGCCGAAGTGGTGGAAGAAGTG
GCGCGGATAAAGCTGGTCAATCCAGGCAATCAAAACCTGATGCGCGGTGACGATGGACTGTTTCGGATGATGAACGGAAC
GACTGCGCCACAGGATGAAACCGTGGCTCTGGAGAGCCGTGCAGTGGAAGGCAGTAACGTCAACCCCGTCGAAGAGATGG
TGGCCCTGATTGATATCCAGCGGCAGTTTGAGCTGCAGGTAAAAATGATGAAAACCGCAGAAGAGAACGATAAAGCTTCT
GCCCAACTCGTACGTATTGGCTAA

Upstream 100 bases:

>100_bases
TCTTATCTCTGCCTTCCCCGCCCTTGCAGGACACGCTCTTGGTTAATTGGCATGCAGTTTGCTTTAGTGAGTGCATGCTA
GATCTTTGACGGAGCCCAGC

Downstream 100 bases:

>100_bases
GGAGACAGGATTATGCATCCCGCATTATGGATAAGTAAAACTGGCTTAGATGCTCAGCAAACGGATATCGCCGTGATATC
CAACAACGTCGCCAACGCCA

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTENPQASFRHGPINSTARDLDV
AVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRPVMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEV
ARIKLVNPGNQNLMRGDDGLFRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKAS
AQLVRIG

Sequences:

>Translated_247_residues
MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTENPQASFRHGPINSTARDLDV
AVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRPVMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEV
ARIKLVNPGNQNLMRGDDGLFRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKAS
AQLVRIG
>Mature_247_residues
MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTENPQASFRHGPINSTARDLDV
AVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRPVMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEV
ARIKLVNPGNQNLMRGDDGLFRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKAS
AQLVRIG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=252, Percent_Identity=42.4603174603175, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1787318, Length=265, Percent_Identity=29.4339622641509, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26680; Mature: 26680

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTE
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEEEEC
NPQASFRHGPINSTARDLDVAVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCCCEECCCCCEECCCCCE
VMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEVARIKLVNPGNQNLMRGDDGL
EECCCCCEEEECCCCEEEECCCCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCCCCCE
FRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKAS
EEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCC
AQLVRIG
EEEEEEC
>Mature Secondary Structure
MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTE
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEEEEC
NPQASFRHGPINSTARDLDVAVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCCCEECCCCCEECCCCCE
VMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEVARIKLVNPGNQNLMRGDDGL
EECCCCCEEEECCCCEEEECCCCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCCCCCE
FRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKAS
EEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCC
AQLVRIG
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]