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The map label for this gene is fliD [H]

Identifier: 119775439

GI number: 119775439

Start: 2769185

End: 2770549

Strand: Reverse

Name: fliD [H]

Synonym: Sama_2304

Alternate gene names: 119775439

Gene position: 2770549-2769185 (Counterclockwise)

Preceding gene: 119775440

Following gene: 119775438

Centisome position: 64.34

GC content: 48.57

Gene sequence:

>1365_bases
ATGGCATTAACTGCAACCGGAATTGGCTCTAATCTGCCCATCAATGACATGGTTTCGGCCATTGTTAACGCAGAGAAAGC
GCCCAAGGAAGCTCTGTTCAACCGAACAGAGGACACCATCAATGCCAAGGTTTCTGCCATAGGTACCTTAAAGAGCGAAC
TGGCCAAATTCCAGGATGCCCTGAAAAAGCTGCAAAAGGGCAGTGAACTCAGTATTCGTAAAGTGACGACCGGTGACAGT
CTCTTTTTTAAAGCGACGGCTGACAAATTTGCCCAAAGTGGCACCTATTCAATCAAAGTTGAGCAACTGGCTTTTTCCCA
TAAGGTCGCAGGTACCAATACCTCAGCAGCAACCGATACAGTGGGGGAAGGGCGTCTTGATTTCACTGTGAATGGTGAAA
GCTTTGGCGTTGATGTTGACGCTGCCGACGATTTAAATGCCATTGCCAAAAAAATTAATGATGCCAGTGACAATAAAGGC
GTGATTGCGACCGTCATCACCAGTGATGCGGGCAGTCGCTTGGTATTTTCTTCGGAAGCAACAGGCACAGCCAATCAGGT
TAGCGTGATAGCCACTGATACCACTGGCACAGGTCTAAATGACATGTTTAATGGTGCCAGTTTGTCTGAGCTGCAACCTG
CCCAAGATGCCATTTTTTACGTTGATAATCAAAAAATCACCTCAGGCAGCAATGAGGTGAAAGGCGCCATCACGGGTGTG
ACTTTGGAGTTGACCAAGGCCGACATTGGTGAAGTAGGTACCCTGACTATCTCTCAGGACGACGAGGCGGTGAAGGCAAA
CGTTACAGGCTTCGTTGACGCCTATAACGCGCTCTTAGATTCAATCAACAAGCTGTCCTCCTACGATGCAGACAAGAAAA
AAGCTGCCGCTCTGCAGGGTGATTCCATGATTCGTTCCCTGGAGTCCCAGCTGCGTAAGATGATCAGCGAACGGGTCGAT
GTTAATGGTGAAACAGTCGCCCTTTACGATATGGGTATCAAGACCGACCGCTATGGCAAGCTGGAAATTGACAGCGCCAA
GCTGGATAAGGCTATTTCAGAAGACATGAGCTCGCTGGAAGGTTTGTTTTCTACCACAAATACTGGCCTTGCAAATCGTC
TTTCCGATCTTGCCAGCACCTACACCAAGGCGGGCGGTGTAATCAGTACCCGCAACGATACGTACAACAGTGAAAAGCAA
CGTCTTGATGATCAGCGGGAAGCCTTCACACGCAAGATGGATGCATTGCAAACACGGTTGTTTAAACAGTTTAATGCGAT
GGATTTGGTGGTTGCTAGCCTCAACCAGCAAACCACAGGCCTGATTGACAGACTGAACTCGCTCCCAGGCGTGGTAAAAG
GCTAA

Upstream 100 bases:

>100_bases
CCCAGTGAAGAAGCACTTAAAATTGCCCAAAAATTGTCAGAAGTCACTGGGCTTCTGATGAAAACAGAGGCTTGAGGTGC
ATACGTAATACGAGGTCGAT

Downstream 100 bases:

>100_bases
ACTGAGTAGAGCGCCAACGGGAGAACGATATGCACGAACTGGAAGCACTCAATAAAGATTTAATTTTATTGTTTGAAAAG
CTGGAGAAAACCACAGCTGA

Product: flagellar hook-associated 2-like protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDALKKLQKGSELSIRKVTTGDS
LFFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDTVGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKG
VIATVITSDAGSRLVFSSEATGTANQVSVIATDTTGTGLNDMFNGASLSELQPAQDAIFYVDNQKITSGSNEVKGAITGV
TLELTKADIGEVGTLTISQDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQGDSMIRSLESQLRKMISERVD
VNGETVALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLEGLFSTTNTGLANRLSDLASTYTKAGGVISTRNDTYNSEKQ
RLDDQREAFTRKMDALQTRLFKQFNAMDLVVASLNQQTTGLIDRLNSLPGVVKG

Sequences:

>Translated_454_residues
MALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDALKKLQKGSELSIRKVTTGDS
LFFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDTVGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKG
VIATVITSDAGSRLVFSSEATGTANQVSVIATDTTGTGLNDMFNGASLSELQPAQDAIFYVDNQKITSGSNEVKGAITGV
TLELTKADIGEVGTLTISQDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQGDSMIRSLESQLRKMISERVD
VNGETVALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLEGLFSTTNTGLANRLSDLASTYTKAGGVISTRNDTYNSEKQ
RLDDQREAFTRKMDALQTRLFKQFNAMDLVVASLNQQTTGLIDRLNSLPGVVKG
>Mature_453_residues
ALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDALKKLQKGSELSIRKVTTGDSL
FFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDTVGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKGV
IATVITSDAGSRLVFSSEATGTANQVSVIATDTTGTGLNDMFNGASLSELQPAQDAIFYVDNQKITSGSNEVKGAITGVT
LELTKADIGEVGTLTISQDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQGDSMIRSLESQLRKMISERVDV
NGETVALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLEGLFSTTNTGLANRLSDLASTYTKAGGVISTRNDTYNSEKQR
LDDQREAFTRKMDALQTRLFKQFNAMDLVVASLNQQTTGLIDRLNSLPGVVKG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=467, Percent_Identity=29.7644539614561, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48312; Mature: 48181

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDA
CEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKKLQKGSELSIRKVTTGDSLFFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDT
HHHHHCCCCCEEEEEECCCCEEEEECHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
VGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKGVIATVITSDAGSRLVFSSEA
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
TGTANQVSVIATDTTGTGLNDMFNGASLSELQPAQDAIFYVDNQKITSGSNEVKGAITGV
CCCCCEEEEEEECCCCCCHHHHCCCCCHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEE
TLELTKADIGEVGTLTISQDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQG
EEEEECCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DSMIRSLESQLRKMISERVDVNGETVALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLE
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHH
GLFSTTNTGLANRLSDLASTYTKAGGVISTRNDTYNSEKQRLDDQREAFTRKMDALQTRL
HHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKQFNAMDLVVASLNQQTTGLIDRLNSLPGVVKG
HHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDA
EEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKKLQKGSELSIRKVTTGDSLFFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDT
HHHHHCCCCCEEEEEECCCCEEEEECHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
VGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKGVIATVITSDAGSRLVFSSEA
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
TGTANQVSVIATDTTGTGLNDMFNGASLSELQPAQDAIFYVDNQKITSGSNEVKGAITGV
CCCCCEEEEEEECCCCCCHHHHCCCCCHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEE
TLELTKADIGEVGTLTISQDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQG
EEEEECCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DSMIRSLESQLRKMISERVDVNGETVALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLE
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHH
GLFSTTNTGLANRLSDLASTYTKAGGVISTRNDTYNSEKQRLDDQREAFTRKMDALQTRL
HHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKQFNAMDLVVASLNQQTTGLIDRLNSLPGVVKG
HHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]