Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is fliK [C]

Identifier: 119775427

GI number: 119775427

Start: 2756429

End: 2758210

Strand: Reverse

Name: fliK [C]

Synonym: Sama_2292

Alternate gene names: 119775427

Gene position: 2758210-2756429 (Counterclockwise)

Preceding gene: 119775428

Following gene: 119775426

Centisome position: 64.05

GC content: 55.33

Gene sequence:

>1782_bases
ATGGCACGGCGTGCCCTGGACAATGCGGGAGAACCACTGATGCAACAGATCCTCAATGTGCTTTTGGGTTCGGCTGGCGC
TGCTGCCGGTCCAGCCAATCCTGAATCATCCGCCATCTCGGCTGATGGTGTTGATTTTGACTCTATCATTTCAAAAACAG
TTGCTTACGAAGAATCTTCCGTCAAAAGTGTGCAGGTCAAAGGCCCAAGTTCCGACAACGCCGGTGATGCCATCTCCCAG
GCTCAAGGCGGTGAGGTCAATGGCGATGCCTCTGGCGATGGCGTGTCTTCCGTACTGGCCCAAATCCAATTTTCCCGTCA
ATTTGCCGCCGATAAGGCTGCCGTCAAAGGCGGCGAAGCTTTGCCGCCGGAAGCGGCAGCGTCAGAAATGCCGGTGGCGA
CAGATGTTGTTATCGATGATGCATCCGTGGACATTGCCGCTGACGCGCTTTTTTTACGTTTCAGCGACCTGATGAAACAG
GCAGATGAGGGTGAGAGAGAGCAAATTGCATCTGAGCTTGGCATGTCTCTGTCGGCGCTTATGGCACTGGATGAAACGGC
ATTTAATACACTGATGGCAGACAATCCCTCCCTCAAAGACGGCTTGGCTTTGTTGCTGCAAGCAGATGCGCCGGGCGCTG
ACACAGATAACGACGCCGCAAATCAGGTCGCGTTGTTGATGCAAACTCTGCTTGGCGCGCCGGTGCAGCAGAATGTGTCC
GCTGACAATCCGTCAGAACATCCAGCCGATATCAGGCTTGGGGGCAGTTCAGCCGAGGCTGCGCTGAATAAGGCTGCCAA
TCTTGCTCCCGAACAGACGCGGGGGTTGGATGTGGCCATGGCGCGCGTTGGCGGTGATCCCGAGGTGGACAATGCTGCTG
TAACTGGCAAGGCTATGGCCGGTTCCACTGAGGCTGCAAGAACTGAGACTTTCCGCGCCGAGACGGACACAAAAAAGGGT
GACGCCGGGCAGGCATTCACCCGCGCATTGGAGGCTACACGGGGGCTCGCTCCTGACGCTGTGGCAGGGAAAGAACTGGG
CGACTTTGGTAATGAAGGCGTTTCTGGAATAACACCGCAGGCTGGTGTTGAAGCTTTAACCAAGGTCAGCGCTGATGCCT
CAAGCAAAGTTAACGCTGAACAACAGGATACGGTCAAAGAGGCTCTGTCGGTTAAATCATTGGAGGCCGCCGGCCGTGCG
GCAGACAGCAACCTTAAAGCGGAGCTGCCTGCCATAGATGCCAAGGGCCAGGCTTCAATAGAGTCTGTGGCCGACATTAA
GCCGCCATCCCCGCTGCAAACCAGCCGCATCCATGAGACACCTGCCATGACAATGTCGCTGCGTACGGCTCAAGAGCGGC
CCATGACACAACCGGATATGGTTGCCCGATTTGCTCCCGTGATGCATACCCAGCTTATTGCCATGGTCAGAGACGGCATA
CAACAGGCCGAAATCCGCCTCGACCCACCCGAACTTGGCTCCATGATGGTTCGCATTCAGGTACAGGGTAATGAAACCCA
GGTTCAGTTCCACGTTAACGCTCAGCAAACCAAAGATGTAGTCGAGCAGGCCATGCCCAGACTCAGAGAGCTGTTGGCTC
AGCAGGGGATGGAATTGACCGATGGACAGGTATCCCATGAGCGTCGAGGCGAAGGCCGCGGACGTCAGGACACCCCGGAA
GGCAGCCAGTTTGTGACCATGGATGAATTTCCAGCAGAAGAGTTACAATTAAGCGCAAATCAGACAACAAGTTATAGCTC
GGGTATAGATTATTACGCTTAA

Upstream 100 bases:

>100_bases
GCGGGATGCGAACAGGAGCCGAGTAGCTGTAACGATTGGCATGGCATTTGCTGGAATCCTGTCAGACTCATAGACTTAGT
CCCAATCGGCGTTGTTTTTG

Downstream 100 bases:

>100_bases
GCAGGTAACCTATAGACACTTGTTTAGTTCAGGCTTGAGTGAGCCTTGATGCACCCATGTGCAGAGCAAAAAAAGGATAA
GCCAGATGGCAGAAGAAGAG

Product: flagellar hook-length control protein FliK

Products: NA

Alternate protein names: Polar Flagellar Hook-Length Control Protein FliK; Flagellar Hook-Length Control Protein FliK; Flagellar Protein; Flagellar Hook Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MARRALDNAGEPLMQQILNVLLGSAGAAAGPANPESSAISADGVDFDSIISKTVAYEESSVKSVQVKGPSSDNAGDAISQ
AQGGEVNGDASGDGVSSVLAQIQFSRQFAADKAAVKGGEALPPEAAASEMPVATDVVIDDASVDIAADALFLRFSDLMKQ
ADEGEREQIASELGMSLSALMALDETAFNTLMADNPSLKDGLALLLQADAPGADTDNDAANQVALLMQTLLGAPVQQNVS
ADNPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMAGSTEAARTETFRAETDTKKG
DAGQAFTRALEATRGLAPDAVAGKELGDFGNEGVSGITPQAGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRA
ADSNLKAELPAIDAKGQASIESVADIKPPSPLQTSRIHETPAMTMSLRTAQERPMTQPDMVARFAPVMHTQLIAMVRDGI
QQAEIRLDPPELGSMMVRIQVQGNETQVQFHVNAQQTKDVVEQAMPRLRELLAQQGMELTDGQVSHERRGEGRGRQDTPE
GSQFVTMDEFPAEELQLSANQTTSYSSGIDYYA

Sequences:

>Translated_593_residues
MARRALDNAGEPLMQQILNVLLGSAGAAAGPANPESSAISADGVDFDSIISKTVAYEESSVKSVQVKGPSSDNAGDAISQ
AQGGEVNGDASGDGVSSVLAQIQFSRQFAADKAAVKGGEALPPEAAASEMPVATDVVIDDASVDIAADALFLRFSDLMKQ
ADEGEREQIASELGMSLSALMALDETAFNTLMADNPSLKDGLALLLQADAPGADTDNDAANQVALLMQTLLGAPVQQNVS
ADNPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMAGSTEAARTETFRAETDTKKG
DAGQAFTRALEATRGLAPDAVAGKELGDFGNEGVSGITPQAGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRA
ADSNLKAELPAIDAKGQASIESVADIKPPSPLQTSRIHETPAMTMSLRTAQERPMTQPDMVARFAPVMHTQLIAMVRDGI
QQAEIRLDPPELGSMMVRIQVQGNETQVQFHVNAQQTKDVVEQAMPRLRELLAQQGMELTDGQVSHERRGEGRGRQDTPE
GSQFVTMDEFPAEELQLSANQTTSYSSGIDYYA
>Mature_592_residues
ARRALDNAGEPLMQQILNVLLGSAGAAAGPANPESSAISADGVDFDSIISKTVAYEESSVKSVQVKGPSSDNAGDAISQA
QGGEVNGDASGDGVSSVLAQIQFSRQFAADKAAVKGGEALPPEAAASEMPVATDVVIDDASVDIAADALFLRFSDLMKQA
DEGEREQIASELGMSLSALMALDETAFNTLMADNPSLKDGLALLLQADAPGADTDNDAANQVALLMQTLLGAPVQQNVSA
DNPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMAGSTEAARTETFRAETDTKKGD
AGQAFTRALEATRGLAPDAVAGKELGDFGNEGVSGITPQAGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRAA
DSNLKAELPAIDAKGQASIESVADIKPPSPLQTSRIHETPAMTMSLRTAQERPMTQPDMVARFAPVMHTQLIAMVRDGIQ
QAEIRLDPPELGSMMVRIQVQGNETQVQFHVNAQQTKDVVEQAMPRLRELLAQQGMELTDGQVSHERRGEGRGRQDTPEG
SQFVTMDEFPAEELQLSANQTTSYSSGIDYYA

Specific function: Controls The Length Of The Flagellar Hook. [C]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61869; Mature: 61738

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRALDNAGEPLMQQILNVLLGSAGAAAGPANPESSAISADGVDFDSIISKTVAYEESS
CCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VKSVQVKGPSSDNAGDAISQAQGGEVNGDASGDGVSSVLAQIQFSRQFAADKAAVKGGEA
CCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPPEAAASEMPVATDVVIDDASVDIAADALFLRFSDLMKQADEGEREQIASELGMSLSAL
CCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
MALDETAFNTLMADNPSLKDGLALLLQADAPGADTDNDAANQVALLMQTLLGAPVQQNVS
HHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCC
ADNPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMA
CCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCEECCCHHC
GSTEAARTETFRAETDTKKGDAGQAFTRALEATRGLAPDAVAGKELGDFGNEGVSGITPQ
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHHCCCCCCCCCCCH
AGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRAADSNLKAELPAIDAKGQASI
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
ESVADIKPPSPLQTSRIHETPAMTMSLRTAQERPMTQPDMVARFAPVMHTQLIAMVRDGI
HHHHCCCCCCCCCHHHHCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCH
QQAEIRLDPPELGSMMVRIQVQGNETQVQFHVNAQQTKDVVEQAMPRLRELLAQQGMELT
HHHHEECCCHHCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
DGQVSHERRGEGRGRQDTPEGSQFVTMDEFPAEELQLSANQTTSYSSGIDYYA
CCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRALDNAGEPLMQQILNVLLGSAGAAAGPANPESSAISADGVDFDSIISKTVAYEESS
CCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VKSVQVKGPSSDNAGDAISQAQGGEVNGDASGDGVSSVLAQIQFSRQFAADKAAVKGGEA
CCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPPEAAASEMPVATDVVIDDASVDIAADALFLRFSDLMKQADEGEREQIASELGMSLSAL
CCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
MALDETAFNTLMADNPSLKDGLALLLQADAPGADTDNDAANQVALLMQTLLGAPVQQNVS
HHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCC
ADNPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMA
CCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCEECCCHHC
GSTEAARTETFRAETDTKKGDAGQAFTRALEATRGLAPDAVAGKELGDFGNEGVSGITPQ
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHHCCCCCCCCCCCH
AGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRAADSNLKAELPAIDAKGQASI
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
ESVADIKPPSPLQTSRIHETPAMTMSLRTAQERPMTQPDMVARFAPVMHTQLIAMVRDGI
HHHHCCCCCCCCCHHHHCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCH
QQAEIRLDPPELGSMMVRIQVQGNETQVQFHVNAQQTKDVVEQAMPRLRELLAQQGMELT
HHHHEECCCHHCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
DGQVSHERRGEGRGRQDTPEGSQFVTMDEFPAEELQLSANQTTSYSSGIDYYA
CCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA