| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheY [H]
Identifier: 119775414
GI number: 119775414
Start: 2745398
End: 2745781
Strand: Reverse
Name: cheY [H]
Synonym: Sama_2279
Alternate gene names: 119775414
Gene position: 2745781-2745398 (Counterclockwise)
Preceding gene: 119775415
Following gene: 119775413
Centisome position: 63.76
GC content: 46.88
Gene sequence:
>384_bases TTGGACAAGAATATGAAGATTCTCATTGTTGACGACTTTTCAACAATGAGACGTATCATCAAGAACTTGTTGCGAGACTT GGGGTTTAATAACACCCAGGAAGCAGATGATGGCTCAACCGCCTTACCGATGCTGCAAAAGGGTGATTTCGATTTTGTGG TTACCGATTGGAACATGCCGGGCATGCAGGGTATCGATTTGCTCAAAGCGATTCGCGCCGATGAAAACCTAAAGCATATT CCGGTACTGATGGTGACCGCTGAAGCCAAGCGTGAGCAGATTATTGCCGCCGCTCAGGCTGGCGTAAATGGCTATGTGGT TAAGCCTTTTACTGCAGCGACACTGAAAGAGAAGCTGGACAAGATATTCGAACGACTTGGTTGA
Upstream 100 bases:
>100_bases ACAGTCAGGCTATGCTCAGGCTCAAAGGTAAGCTCAAGCATTGGACACAAGTATAAATTATTATTTGAGCAGCTAGAGTG TCAGCTCACCGGAGGAAACC
Downstream 100 bases:
>100_bases GCAAGGATGGGCTATGCAGGCAAACACATCAGGGCTCATTAGTCTCGAACAGGCACAGGAACTCGTCACGCTCCTGAGTG CGGGTGAGCAGGAAAAGGCT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMPGMQGIDLLKAIRADENLKHI PVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLDKIFERLG
Sequences:
>Translated_127_residues MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMPGMQGIDLLKAIRADENLKHI PVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLDKIFERLG >Mature_127_residues MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMPGMQGIDLLKAIRADENLKHI PVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLDKIFERLG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY is likely to be involved in changing the direction of flagellar rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=126, Percent_Identity=69.0476190476191, Blast_Score=187, Evalue=2e-49, Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=28.6885245901639, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=125, Percent_Identity=35.2, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=39.0476190476191, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1788521, Length=104, Percent_Identity=36.5384615384615, Blast_Score=66, Evalue=9e-13, Organism=Escherichia coli, GI1790437, Length=118, Percent_Identity=36.4406779661017, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1789809, Length=130, Percent_Identity=27.6923076923077, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788713, Length=124, Percent_Identity=32.258064516129, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 14224; Mature: 14224
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMP CCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCC GMQGIDLLKAIRADENLKHIPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLD CCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH KIFERLG HHHHHCC >Mature Secondary Structure MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMP CCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCC GMQGIDLLKAIRADENLKHIPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLD CCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH KIFERLG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1560774; 10984043; 7860605 [H]