| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheA [H]
Identifier: 119775412
GI number: 119775412
Start: 2742352
End: 2744631
Strand: Reverse
Name: cheA [H]
Synonym: Sama_2277
Alternate gene names: 119775412
Gene position: 2744631-2742352 (Counterclockwise)
Preceding gene: 119775413
Following gene: 119775411
Centisome position: 63.74
GC content: 52.89
Gene sequence:
>2280_bases ATGTCATTTGATGTTGATGAAGAGATTCTGCAGGATTTTTTGATAGAAGCCGGCGAAATTCTCGAGCTTCTGCAGGAACA ATTGGTCGCTCTTGAGAATAATCCGGAAGACACGGATTTGCTCAATGCCATTTTCCGCGGCTTTCACACTGTTAAAGGTG GGGCAGGCTTCCTGGGGCTCGCACCCATGGTGGACGTCTGTCACGAATCGGAAAATACCTTTGATTTACTCCGAACAGGT AAACGTCACGTTACTGCTGAATTGATGGATATCATTCTGCAGGCGGTGGACGCAATCAATACCATGTTCGCCCAAACTCA GGCAGGACAAGCGCAAGAGCCAGCGTCTGCCGAGTTACTCGATAAACTCAAGCTCCTCTCCTCCGGTGCACCCTTACCGT CAGAAGGCGGAGAAGCCTCCTCATCGTCTTCATCTGAACCCACGATAAACGTGGACAATGAGATCCCCGGCGTTGAACTT TTTGGCGACCTTGAAGAGCCTGCGGCGGCCGAGCCTGTTACCCAGGCTCCTGCCATGACGGATGACTTTCTGTTTGACTC ACCCGCCAGCGATTCCAGCATCGATGAAATCAACGAAGCCGAATTCGAAGCACTCTTGGATGCTCTGCACGGAAGTGGTA AAGGTCCAGGTGTCACCGGGACGTCTGGCGCTGCGCCAAGTGCCGACAAAGCTGCCGCCAAAGCCGCACCGGCCGGTGAT GAAATTACCGATGACGAGTTTGAAGCCTTACTCGATGAACTCCATGGTTCGGGCAAGTTTAAAGCCACCACCGATAAAGT GGTTGCCAAAGTGGAAGATAGCCCTGCTGATCATGTAGATACCGATGAAATTACCGATGACGAGTTTGAAAAGTTGTTGG ATGAACTTCACGGTAAGGGTACAGGGCCAGGCGTTGTCTCTGCAGCCAAACCTGCCGCTCCCGCCACGAGCCAACCCAAA TCAGCGGCAGCGCCTGCAGAGTCGCCAAAGCCCGTTGCAAAACCCTCATCACCTGTTGAAGCACCAAAACCTGTTGTGGC CGCAGAAAAAAGTCCAGCACCTGTCGCTAAAGCCGCACCGGCAGCCGGCGCTTCTGTGCCTCAGGGCGAGACCACGGTAA GGGTCGACACCGCCCGACTCGACCAGATAATGAACATGGTCGGTGAGCTGGTGCTGGTACGTAACCGCTTGGTCAGCCTG GGTGTTACCCGCGAAGATGAGGAAATGTCCAAAGCGCTGGCTAACCTCGATTTGGTGACTGCCGACTTGCAGGGCGCTGT GATGAAAACACGGATGCAGCCCATCAAGAAGGTATTCGGCCGTTTCCCGCGGGTAGTTCGTGACCTGGCACGCAGCCTGA ATAAAGAAATTGATTTGGTATTGGTAGGCGAGGAAACCGATCTCGATAAAAACCTGGTGGAAGCCCTCGCTGACCCGCTG GTGCACCTGGTGCGCAACTCTGTCGATCATGGGATTGAAATGCCCGCCGATCGTGTTGCCAGTGGTAAACCCAAGACAGG TACCATTACGCTGTCGGCAAGCCAGGAAGGGGACCACATTCTCCTGAAAATCGAAGATGACGGCGCGGGGATGGACCCAG AGAAACTCAAGGCCATCGCCGTTAAACGTGGTGTGCTTGATGAAGATGCTGCGGCCCGTATGTCGGACCATGAGGCCTAC AATCTGATTTTTGCCCCCGGTTTCTCCACCAAAACCGAAATTTCTGATATTTCAGGCCGTGGTGTGGGTATGGACGTGGT GAAAACCCGTATTACCCAGCTTAACGGAACCGTGCACATCGATTCGGTTAAAGGCAAGGGTACCATCCTTGAGATTAAGG TGCCGCTAACGCTGGCGATTATGCCAACGCTGATGGTGGAAGTGGCCAAGCAGGTCTTTGCCTTACCTCTGTCGAGCGTT AATGAGATATTCCACCTGGATTTGACCAAGACCAACATAGTGGACGGTCAGTTGACTGTGATTTTCCGGGATAAGGCCGT TCCACTCTTTTATCTGGAGCAGTGGCTGAGTCGCAGCAAAACCAAGTTCAAGCATGGCGATAAAAAGCATGGCCATGTGG TGATTGTGCAGTTGGGAACAATGCAAATCGGTTTTGTGGTCGATGCCTTAATCGGACAGGAAGAAGTGGTGATAAAGCCG CTTGGCGCTTTGCTTCATGGCACTCCGGGTATGGCCGGTGCCACCATTACGTCAGACGGTGGAATAGCGCTGATTTTGGA TGTTCCCGGATTATTGAAACATTATGCCAAGCGGAAGTAG
Upstream 100 bases:
>100_bases CCCCATCATGAATGCCGAGCTTCGTCAGGATGTGGTGACTGGTCAGGATGAAGTCGATGACCTGCTGTCCAGCCTGGGTT TCTGATAAGGAGTCAATTTA
Downstream 100 bases:
>100_bases CTCAAGCGCGTGCTGTTGGCAGGAATATAAATGACAATAAAAGTATTGGTCGTTGATGACTCAAGCTTTTTCCGACGTCG GGTCAGTGAAATAGTCACTC
Product: putative CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MSFDVDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGLAPMVDVCHESENTFDLLRTG KRHVTAELMDIILQAVDAINTMFAQTQAGQAQEPASAELLDKLKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVEL FGDLEEPAAAEPVTQAPAMTDDFLFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGD EITDDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKGTGPGVVSAAKPAAPATSQPK SAAAPAESPKPVAKPSSPVEAPKPVVAAEKSPAPVAKAAPAAGASVPQGETTVRVDTARLDQIMNMVGELVLVRNRLVSL GVTREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLVLVGEETDLDKNLVEALADPL VHLVRNSVDHGIEMPADRVASGKPKTGTITLSASQEGDHILLKIEDDGAGMDPEKLKAIAVKRGVLDEDAAARMSDHEAY NLIFAPGFSTKTEISDISGRGVGMDVVKTRITQLNGTVHIDSVKGKGTILEIKVPLTLAIMPTLMVEVAKQVFALPLSSV NEIFHLDLTKTNIVDGQLTVIFRDKAVPLFYLEQWLSRSKTKFKHGDKKHGHVVIVQLGTMQIGFVVDALIGQEEVVIKP LGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKRK
Sequences:
>Translated_759_residues MSFDVDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGLAPMVDVCHESENTFDLLRTG KRHVTAELMDIILQAVDAINTMFAQTQAGQAQEPASAELLDKLKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVEL FGDLEEPAAAEPVTQAPAMTDDFLFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGD EITDDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKGTGPGVVSAAKPAAPATSQPK SAAAPAESPKPVAKPSSPVEAPKPVVAAEKSPAPVAKAAPAAGASVPQGETTVRVDTARLDQIMNMVGELVLVRNRLVSL GVTREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLVLVGEETDLDKNLVEALADPL VHLVRNSVDHGIEMPADRVASGKPKTGTITLSASQEGDHILLKIEDDGAGMDPEKLKAIAVKRGVLDEDAAARMSDHEAY NLIFAPGFSTKTEISDISGRGVGMDVVKTRITQLNGTVHIDSVKGKGTILEIKVPLTLAIMPTLMVEVAKQVFALPLSSV NEIFHLDLTKTNIVDGQLTVIFRDKAVPLFYLEQWLSRSKTKFKHGDKKHGHVVIVQLGTMQIGFVVDALIGQEEVVIKP LGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKRK >Mature_758_residues SFDVDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGLAPMVDVCHESENTFDLLRTGK RHVTAELMDIILQAVDAINTMFAQTQAGQAQEPASAELLDKLKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVELF GDLEEPAAAEPVTQAPAMTDDFLFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGDE ITDDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKGTGPGVVSAAKPAAPATSQPKS AAAPAESPKPVAKPSSPVEAPKPVVAAEKSPAPVAKAAPAAGASVPQGETTVRVDTARLDQIMNMVGELVLVRNRLVSLG VTREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLVLVGEETDLDKNLVEALADPLV HLVRNSVDHGIEMPADRVASGKPKTGTITLSASQEGDHILLKIEDDGAGMDPEKLKAIAVKRGVLDEDAAARMSDHEAYN LIFAPGFSTKTEISDISGRGVGMDVVKTRITQLNGTVHIDSVKGKGTILEIKVPLTLAIMPTLMVEVAKQVFALPLSSVN EIFHLDLTKTNIVDGQLTVIFRDKAVPLFYLEQWLSRSKTKFKHGDKKHGHVVIVQLGTMQIGFVVDALIGQEEVVIKPL GALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKRK
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Membrane (Potential). Note=It is not known whether CheA is actually membrane bound although CheA has two regions at the C-terminal end with the potential to be transmembrane regions [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=425, Percent_Identity=40.2352941176471, Blast_Score=293, Evalue=4e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 80433; Mature: 80302
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDVDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGL CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHH APMVDVCHESENTFDLLRTGKRHVTAELMDIILQAVDAINTMFAQTQAGQAQEPASAELL HHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DKLKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVELFGDLEEPAAAEPVTQAPAMT HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCC DDFLFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC EITDDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKG CCCHHHHHHHHHHHCCCCCCEECHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC TGPGVVSAAKPAAPATSQPKSAAAPAESPKPVAKPSSPVEAPKPVVAAEKSPAPVAKAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHCCC AAGASVPQGETTVRVDTARLDQIMNMVGELVLVRNRLVSLGVTREDEEMSKALANLDLVT CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE ADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLVLVGEETDLDKNLVEALADPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH VHLVRNSVDHGIEMPADRVASGKPKTGTITLSASQEGDHILLKIEDDGAGMDPEKLKAIA HHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHH VKRGVLDEDAAARMSDHEAYNLIFAPGFSTKTEISDISGRGVGMDVVKTRITQLNGTVHI HHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEE DSVKGKGTILEIKVPLTLAIMPTLMVEVAKQVFALPLSSVNEIFHLDLTKTNIVDGQLTV ECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEECCEEEE IFRDKAVPLFYLEQWLSRSKTKFKHGDKKHGHVVIVQLGTMQIGFVVDALIGQEEVVIKP EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHH LGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKRK HHHHHCCCCCCCCCEEECCCCEEEEEECCHHHHHHHCCC >Mature Secondary Structure SFDVDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGL CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHH APMVDVCHESENTFDLLRTGKRHVTAELMDIILQAVDAINTMFAQTQAGQAQEPASAELL HHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DKLKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVELFGDLEEPAAAEPVTQAPAMT HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCC DDFLFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC EITDDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKG CCCHHHHHHHHHHHCCCCCCEECHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC TGPGVVSAAKPAAPATSQPKSAAAPAESPKPVAKPSSPVEAPKPVVAAEKSPAPVAKAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHCCC AAGASVPQGETTVRVDTARLDQIMNMVGELVLVRNRLVSLGVTREDEEMSKALANLDLVT CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE ADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLVLVGEETDLDKNLVEALADPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH VHLVRNSVDHGIEMPADRVASGKPKTGTITLSASQEGDHILLKIEDDGAGMDPEKLKAIA HHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHH VKRGVLDEDAAARMSDHEAYNLIFAPGFSTKTEISDISGRGVGMDVVKTRITQLNGTVHI HHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEE DSVKGKGTILEIKVPLTLAIMPTLMVEVAKQVFALPLSSVNEIFHLDLTKTNIVDGQLTV ECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEECCEEEE IFRDKAVPLFYLEQWLSRSKTKFKHGDKKHGHVVIVQLGTMQIGFVVDALIGQEEVVIKP EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHH LGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKRK HHHHHCCCCCCCCCEEECCCCEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1938941; 9384377 [H]