| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is flhB [C]
Identifier: 119775405
GI number: 119775405
Start: 2737519
End: 2737821
Strand: Direct
Name: flhB [C]
Synonym: Sama_2270
Alternate gene names: 119775405
Gene position: 2737519-2737821 (Clockwise)
Preceding gene: 119775404
Following gene: 119775456
Centisome position: 63.57
GC content: 48.51
Gene sequence:
>303_bases ATGAATAAACAAGACAAGATAGCGGTAGCCTTAAGTTACGACGGTAACGGGGCGCCCAAAGTCACAGCCAAAGGCGAGGC CTTACTTGCAGAGGAGATTATTGCTCTCGCCCGCGAATGTGGCATCCACATTCACGAAGACCCTGCGCTGGCCAATTTTC TGACCATGATGGAACTCAACGAAAGCATTCCGAAAGAGCTTTATGTACTCATCGCTGAACTGCTGTCGTTTGTGTACATG TTGGATGGTCGCTATCCGGAAGAATGGGCAAACATGCACAACAAGATAAAGACATCGGTGTAG
Upstream 100 bases:
>100_bases CATTGGGCTTTGGCACCACAATACTTTCCTGTCGCCACGATACCGTGCCCGGCAGTCTGCTGCCCGGCAAATCCTTTGCC GTGGATTTAAGGGCCTGAGC
Downstream 100 bases:
>100_bases TAGAAAAAAAGCTGCCGACGGCAGCTTTTTTTCTACTACATCAAAGACAGGGTGATAGTTGCTATCGTCCTGTCTTAAAA CCCATCTCAAGGATTCGCAA
Product: FlhB domain-containing protein
Products: NA
Alternate protein names: Type III Secretion Exporter; Type III Secretion Protein; Flagellar Biosynthetic Protein FlhB; Flagellar Protein FhlB-Like Protein; Flagellar Biosynthesis Protein; Flagellar Biosynthesis-Related Protein; C-Terminal FlhB Domain-Containing Protein; Flagellar Protein FlhB; Flagellar Biosynthesis; Probably Flagellar Biosynthesis-Related Protein
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNKQDKIAVALSYDGNGAPKVTAKGEALLAEEIIALARECGIHIHEDPALANFLTMMELNESIPKELYVLIAELLSFVYM LDGRYPEEWANMHNKIKTSV
Sequences:
>Translated_100_residues MNKQDKIAVALSYDGNGAPKVTAKGEALLAEEIIALARECGIHIHEDPALANFLTMMELNESIPKELYVLIAELLSFVYM LDGRYPEEWANMHNKIKTSV >Mature_100_residues MNKQDKIAVALSYDGNGAPKVTAKGEALLAEEIIALARECGIHIHEDPALANFLTMMELNESIPKELYVLIAELLSFVYM LDGRYPEEWANMHNKIKTSV
Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]
COG id: COG2257
COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane. [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11162; Mature: 11162
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQDKIAVALSYDGNGAPKVTAKGEALLAEEIIALARECGIHIHEDPALANFLTMMELN CCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH ESIPKELYVLIAELLSFVYMLDGRYPEEWANMHNKIKTSV HCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNKQDKIAVALSYDGNGAPKVTAKGEALLAEEIIALARECGIHIHEDPALANFLTMMELN CCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH ESIPKELYVLIAELLSFVYMLDGRYPEEWANMHNKIKTSV HCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA