| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775354
Identifier: 119775354
GI number: 119775354
Start: 2682473
End: 2683459
Strand: Reverse
Name: 119775354
Synonym: Sama_2219
Alternate gene names: NA
Gene position: 2683459-2682473 (Counterclockwise)
Preceding gene: 119775355
Following gene: 119775353
Centisome position: 62.32
GC content: 55.22
Gene sequence:
>987_bases ATGAAATTAGCCACATATAACAATGGTCGCCGCGATGGTCAGCTGATGCTGGTAAGCCGTGACCTGACCAAGGCCGTTGC CGTACCCGCCATTGCTCACACCATGCAGCAGCTGCTGGATGCCTGGGCACTGCTCAGCCCTCAGCTTACCGAGCTGTACG ATGCTCTCAACGCCGGTCAGCTTGAAAACACCGTCGATTTTGACGAAACCAAGTGTCTGTCGCCATTTCCACGCGCATTC CAGTGGGCCGATGGCAGTGCCTATGTAAACCACGTTGAGCTGGTGCGTAAGGCCCGTGGCGCAGAAATGCCTGACACCTT CTGGACCGATCCGCTGTTTTATCAGGGCGGCTCCGACAGCTTTATTCCACCACGCAGCAATATTGAAATGGGCAGCGAAG ATTGGGGTATCGACTTCGAGTCTGAAATCGCCGTGGTAACCGACGATGTGCCCATGGGGATCTCTGCCGAAAACGCCGCA TCACACATCAAGCTGTTGATGCTGGTGAATGACGTGTCACTGCGTAACCTGATCCCGGCCGAACTGGCCAAGGGCTTTGG TTTCTTCCAGTCCAAGCCTTCAAGCAGCTTCTCACCCGTGGCCGTAACTCCGGATGAACTGGGCGATAAATGGCAGGACA GCAAGGTGCATCTGCCACTTATCACTCACCTGAACGGTGAACTCTTTGGTAAGCCCAATGCCGGTGTGGACATGACGTTC AACTTCAGTCAGCTGGTAGCCCATGTAACCAAGACCCGCCCGCTGGGCGCCGGTGCCATCATAGGTTCAGGTACCATTTC CAACTACGACCGCAGCGCCGGCTCAAGCTGTCTGGCTGAAAAGCGTATGCTGGAAGTGATTGCCGATGGCAAAGCTTCCA CTCCCTTTATGCGCTTTGGCGATCGGGTGCGTATCGAAATGCTCGACGATGCTGGCAACAGCATTTTCGGTGCCATCGAT CAGCAGGTGGTTGAATACAAGGCGTGA
Upstream 100 bases:
>100_bases GAGTCACGCTATTTCAAAGGTTCGCGCCTTGGGGTATTTGTTACGCCATTAAAAACCGTATCGCGCCGGCAATGGCGCGG TGCGAGGACAGGAGCAGAGA
Downstream 100 bases:
>100_bases TGTCTTGAGTGATGAAAAACGGGGCCTCGGCCCCGTTTTGTGTATTGTGGCCCGTAGAATGTCGGCGACCGGCAAGGCAG AGGAGAACAGCATGAAACTT
Product: fumarylacetoacetate hydrolase family protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKLATYNNGRRDGQLMLVSRDLTKAVAVPAIAHTMQQLLDAWALLSPQLTELYDALNAGQLENTVDFDETKCLSPFPRAF QWADGSAYVNHVELVRKARGAEMPDTFWTDPLFYQGGSDSFIPPRSNIEMGSEDWGIDFESEIAVVTDDVPMGISAENAA SHIKLLMLVNDVSLRNLIPAELAKGFGFFQSKPSSSFSPVAVTPDELGDKWQDSKVHLPLITHLNGELFGKPNAGVDMTF NFSQLVAHVTKTRPLGAGAIIGSGTISNYDRSAGSSCLAEKRMLEVIADGKASTPFMRFGDRVRIEMLDDAGNSIFGAID QQVVEYKA
Sequences:
>Translated_328_residues MKLATYNNGRRDGQLMLVSRDLTKAVAVPAIAHTMQQLLDAWALLSPQLTELYDALNAGQLENTVDFDETKCLSPFPRAF QWADGSAYVNHVELVRKARGAEMPDTFWTDPLFYQGGSDSFIPPRSNIEMGSEDWGIDFESEIAVVTDDVPMGISAENAA SHIKLLMLVNDVSLRNLIPAELAKGFGFFQSKPSSSFSPVAVTPDELGDKWQDSKVHLPLITHLNGELFGKPNAGVDMTF NFSQLVAHVTKTRPLGAGAIIGSGTISNYDRSAGSSCLAEKRMLEVIADGKASTPFMRFGDRVRIEMLDDAGNSIFGAID QQVVEYKA >Mature_328_residues MKLATYNNGRRDGQLMLVSRDLTKAVAVPAIAHTMQQLLDAWALLSPQLTELYDALNAGQLENTVDFDETKCLSPFPRAF QWADGSAYVNHVELVRKARGAEMPDTFWTDPLFYQGGSDSFIPPRSNIEMGSEDWGIDFESEIAVVTDDVPMGISAENAA SHIKLLMLVNDVSLRNLIPAELAKGFGFFQSKPSSSFSPVAVTPDELGDKWQDSKVHLPLITHLNGELFGKPNAGVDMTF NFSQLVAHVTKTRPLGAGAIIGSGTISNYDRSAGSSCLAEKRMLEVIADGKASTPFMRFGDRVRIEMLDDAGNSIFGAID QQVVEYKA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35824; Mature: 35824
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLATYNNGRRDGQLMLVSRDLTKAVAVPAIAHTMQQLLDAWALLSPQLTELYDALNAGQ CEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC LENTVDFDETKCLSPFPRAFQWADGSAYVNHVELVRKARGAEMPDTFWTDPLFYQGGSDS CCCCCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC FIPPRSNIEMGSEDWGIDFESEIAVVTDDVPMGISAENAASHIKLLMLVNDVSLRNLIPA CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEECCHHHHHCCHH ELAKGFGFFQSKPSSSFSPVAVTPDELGDKWQDSKVHLPLITHLNGELFGKPNAGVDMTF HHHHHCCHHCCCCCCCCCCEEECHHHHCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEE NFSQLVAHVTKTRPLGAGAIIGSGTISNYDRSAGSSCLAEKRMLEVIADGKASTPFMRFG CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCC DRVRIEMLDDAGNSIFGAIDQQVVEYKA CEEEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKLATYNNGRRDGQLMLVSRDLTKAVAVPAIAHTMQQLLDAWALLSPQLTELYDALNAGQ CEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC LENTVDFDETKCLSPFPRAFQWADGSAYVNHVELVRKARGAEMPDTFWTDPLFYQGGSDS CCCCCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC FIPPRSNIEMGSEDWGIDFESEIAVVTDDVPMGISAENAASHIKLLMLVNDVSLRNLIPA CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEECCHHHHHCCHH ELAKGFGFFQSKPSSSFSPVAVTPDELGDKWQDSKVHLPLITHLNGELFGKPNAGVDMTF HHHHHCCHHCCCCCCCCCCEEECHHHHCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEE NFSQLVAHVTKTRPLGAGAIIGSGTISNYDRSAGSSCLAEKRMLEVIADGKASTPFMRFG CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCC DRVRIEMLDDAGNSIFGAIDQQVVEYKA CEEEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA