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The map label for this gene is ynfM [H]

Identifier: 119775349

GI number: 119775349

Start: 2676452

End: 2677681

Strand: Reverse

Name: ynfM [H]

Synonym: Sama_2214

Alternate gene names: 119775349

Gene position: 2677681-2676452 (Counterclockwise)

Preceding gene: 119775351

Following gene: 119775342

Centisome position: 62.18

GC content: 55.37

Gene sequence:

>1230_bases
GTGAACGGCAGAATATCCAGAGCCGACGCGCGGCGCTTAATTTACGGGTTATCCCTGGCTTCAGTGGTGGTTTATATCAA
CCTGTATCTGGTGCAGGGCATGCTGCCCATGCTGGCCGAACACTTTGCCATCAGCCCTGGGGCATCCACGCTTATCCTCT
CCGTCAGCAGCTTCTCACTGGCATTTTCGTTGCTCGGCTATGCACTGATTTCTGATGCCATTGGCCGTTTCAGGCCGCTG
ATTATCAGCCTGTGGCTGCTGGCACTCACCAATCCGCTGATGCTGGTGGTCGACAGCTGGTCGCAGATGCTCTCCTTAAG
ATTGCTGCAGGGAATATTACTTGCCGCCGTGCCAGCCATTGCCATGGCGTATCTGCGGGATAAATTGCCTCTACCGGCCC
TGATAAAGGCCGGGGCCTTTTATATCGCGGCCAATAGCTTCGGTGGCATTATTGGCCGTTTGCTGGGGGGCTTTATGGCT
CAGCATCTGAGCTGGGTTGCATCAGTGGTGCTGCTGTCTGGCATCACGCTGGTGGCTGTGGTCATAAGCCATCGATTTTT
GGCGCCTCTCAGTGATGCTTCCAGAAAGCCAATCAATGACGCGCTCAAGGTGGGCAGCGGTGCGGGGCGGCCCTGGAAAG
GTTTTATTTTGCACCTAGGTAATCCGCAGCTTCGGGTGTTTTACCTGATTGGCGGACTTGCCTTTATGGTGATGGTGAAT
CAATTCAGCTTTATTCAGTTGCATTTGCTGGAGCCGCCTTTCGGCTGGAGCCGCTTTGAAGTGACCTTGATTTTCCTCTG
TTACCTCAGCGGCACCTTAAGCGCGTACCGCTCCGGCAGTGCCATCAAACATTTAGGGGTGCCTGGTTTGCTGGGGCTGT
CGCTGGTGCTGATGGTGGCCGGCAGTGTACTGACGCTGCTTAATACCCAACTCGCCATTATTCTTGGCTTTTTGCTCAGT
GCCTGCGGCTTTTTCCTTATCCATGCCTGCTGTAACAGTCAGGTTGCGCTCAGGGCCACGGGCCACAGAGCCAAAGCCTC
GGCCCTGTACCTGTGCTGCTACTACCTTGGGGCATCGCTTGGCGGGCCTTTCCTGATGCCTTTCTGGCATCAGGCTGGCT
GGGCCGGCGTTGTTTATGGCTCTTTGATAGTGCTTGGCGTTACTGCGGTTTTTGCTTGGTTTGCCCTGCGTCGCGGCAAG
GGTGCTATGCCTCTTCCTGCGTATCGTTAA

Upstream 100 bases:

>100_bases
TATAAAAAATATCAATAAATAATAGATGAAATATCTATTATGTTAATGTTAGCCGCGCCGCTACCCTGAAGCAATCAGAG
TCTTGGTATTGAGGTGCGCC

Downstream 100 bases:

>100_bases
GGTAGTGCTTGCGGTCCAGATCGTACTTGCGCATCTTGTCGTACAGGGTTTTGCGGGGCAGCTCCAACTGCTCCATGGTT
TGCTTGATAGAGCCGCGATT

Product: multidrug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNGRISRADARRLIYGLSLASVVVYINLYLVQGMLPMLAEHFAISPGASTLILSVSSFSLAFSLLGYALISDAIGRFRPL
IISLWLLALTNPLMLVVDSWSQMLSLRLLQGILLAAVPAIAMAYLRDKLPLPALIKAGAFYIAANSFGGIIGRLLGGFMA
QHLSWVASVVLLSGITLVAVVISHRFLAPLSDASRKPINDALKVGSGAGRPWKGFILHLGNPQLRVFYLIGGLAFMVMVN
QFSFIQLHLLEPPFGWSRFEVTLIFLCYLSGTLSAYRSGSAIKHLGVPGLLGLSLVLMVAGSVLTLLNTQLAIILGFLLS
ACGFFLIHACCNSQVALRATGHRAKASALYLCCYYLGASLGGPFLMPFWHQAGWAGVVYGSLIVLGVTAVFAWFALRRGK
GAMPLPAYR

Sequences:

>Translated_409_residues
MNGRISRADARRLIYGLSLASVVVYINLYLVQGMLPMLAEHFAISPGASTLILSVSSFSLAFSLLGYALISDAIGRFRPL
IISLWLLALTNPLMLVVDSWSQMLSLRLLQGILLAAVPAIAMAYLRDKLPLPALIKAGAFYIAANSFGGIIGRLLGGFMA
QHLSWVASVVLLSGITLVAVVISHRFLAPLSDASRKPINDALKVGSGAGRPWKGFILHLGNPQLRVFYLIGGLAFMVMVN
QFSFIQLHLLEPPFGWSRFEVTLIFLCYLSGTLSAYRSGSAIKHLGVPGLLGLSLVLMVAGSVLTLLNTQLAIILGFLLS
ACGFFLIHACCNSQVALRATGHRAKASALYLCCYYLGASLGGPFLMPFWHQAGWAGVVYGSLIVLGVTAVFAWFALRRGK
GAMPLPAYR
>Mature_409_residues
MNGRISRADARRLIYGLSLASVVVYINLYLVQGMLPMLAEHFAISPGASTLILSVSSFSLAFSLLGYALISDAIGRFRPL
IISLWLLALTNPLMLVVDSWSQMLSLRLLQGILLAAVPAIAMAYLRDKLPLPALIKAGAFYIAANSFGGIIGRLLGGFMA
QHLSWVASVVLLSGITLVAVVISHRFLAPLSDASRKPINDALKVGSGAGRPWKGFILHLGNPQLRVFYLIGGLAFMVMVN
QFSFIQLHLLEPPFGWSRFEVTLIFLCYLSGTLSAYRSGSAIKHLGVPGLLGLSLVLMVAGSVLTLLNTQLAIILGFLLS
ACGFFLIHACCNSQVALRATGHRAKASALYLCCYYLGASLGGPFLMPFWHQAGWAGVVYGSLIVLGVTAVFAWFALRRGK
GAMPLPAYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=389, Percent_Identity=31.3624678663239, Blast_Score=151, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43973; Mature: 43973

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRISRADARRLIYGLSLASVVVYINLYLVQGMLPMLAEHFAISPGASTLILSVSSFSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
AFSLLGYALISDAIGRFRPLIISLWLLALTNPLMLVVDSWSQMLSLRLLQGILLAAVPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHH
AMAYLRDKLPLPALIKAGAFYIAANSFGGIIGRLLGGFMAQHLSWVASVVLLSGITLVAV
HHHHHHHCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISHRFLAPLSDASRKPINDALKVGSGAGRPWKGFILHLGNPQLRVFYLIGGLAFMVMVN
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHH
QFSFIQLHLLEPPFGWSRFEVTLIFLCYLSGTLSAYRSGSAIKHLGVPGLLGLSLVLMVA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH
GSVLTLLNTQLAIILGFLLSACGFFLIHACCNSQVALRATGHRAKASALYLCCYYLGASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCC
GGPFLMPFWHQAGWAGVVYGSLIVLGVTAVFAWFALRRGKGAMPLPAYR
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNGRISRADARRLIYGLSLASVVVYINLYLVQGMLPMLAEHFAISPGASTLILSVSSFSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
AFSLLGYALISDAIGRFRPLIISLWLLALTNPLMLVVDSWSQMLSLRLLQGILLAAVPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHH
AMAYLRDKLPLPALIKAGAFYIAANSFGGIIGRLLGGFMAQHLSWVASVVLLSGITLVAV
HHHHHHHCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISHRFLAPLSDASRKPINDALKVGSGAGRPWKGFILHLGNPQLRVFYLIGGLAFMVMVN
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHH
QFSFIQLHLLEPPFGWSRFEVTLIFLCYLSGTLSAYRSGSAIKHLGVPGLLGLSLVLMVA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH
GSVLTLLNTQLAIILGFLLSACGFFLIHACCNSQVALRATGHRAKASALYLCCYYLGASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCC
GGPFLMPFWHQAGWAGVVYGSLIVLGVTAVFAWFALRRGKGAMPLPAYR
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]